Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0792 ATGGCACTGAAACTTTCATTGCCTTTGCCTCGTACTATTCACACCCCTTCCCTCAGAAACCCCAACCTAATTTCACTTCCTTCATCACTCTCAGCTCGCAACTACAACGCTGCTCTTCCTTCGAAATCGTTCCATGCGGCGTCAATACGACGTCGCTTTGGGTTCCGACCGGCTCGTGTGGCTCAGGGACAAGAGCTCAGTGGTAGTTCCGAAGATAACGATGGAATGGTGGTGGCGGTGGAAGAAGAGGGTGAGAAGAAGGAGCTTGCAGATCAGGGTATATGGAGCCAGGTGAAGGAGATTGTGATGTTTACTGGGCCTGCTACTGGGCTTTGGTTGTGTGGGCCCATCATGAGCCTCATGGATACTGCTGTTATTGGTCACGGTAGCTCAATTGAGCTTGCTGCCTTAGGTCCTGCCACGGTTGTGTGTGATTACATGAGCTACATGTTCATGTTCCTCTCTATTGCTACCTCCAATATGGTTGCAACTGCCCTTGCTAACCAGGATAGAGAAGAAGTTCAGCATCACATATCTGTCTTACTTTTTGTTGGCTTAGCCTGTGGCATCTCGATGCTTTTGTTCACAAAGGTGTTTGGTGCAGCAATACTCACCGCTTTTACTGGACCAAAGAATGCACATGTTGTACCTGCTGCTAATACTTATGTTCAGATTCGAAGCTTGGCATGGCCTGCTTTACTTTCTGGATGGGTTGCTCAGAGTGCAAGTCTTGGCATGAAGGATTCCTGGGGACCTTTGAAGTCTTTGGCAGCTGCCACCGTTATAAATGGAATTGGTCTTGTAGTTCTGTGCCGCATCTTAGGATATGGTATTGCAGGGGCTGCATGGGCTGCAATGATATCTCAAGTATTTTCTGCATATATGATGATTCAAAATCTAAACAAGAAAGGATTCGATGCACTTGCTTTATCCATTCCTTCAGGGAAAGAATTTCTGAATATACTTGGTCTTGCTGCTCCTGTATTTTTAACACTGATGTCAAAGGTGGCTTTCTACTCGCTGCTTATATATAATGCTACTTCAATGGGTACCCATACAATGGCCGCTCACCAAGTTATGGTTCAAATCTACATGACATGTACAGTTTGGGGCGAACCTCTCTCCCAAACTGCTCAATCATTTATGCCTGGGTTGATATATGGAGTAAATCGGAATTTGGCAAAGGCCTGGTTGCTTCTAAGGTCTCTTGTAAGTATTGGAGCTATACTTGGATTGTTGTTGGGGATTGTTGGAACATCTATTCCTTGGTTATTCCCTTATCTTTTTACACCTGATCAGATGGTCATCCAAGGGATGCATAAAGTGCTGATACCGTATTTCATAGCGCTATCTGTGACACCACCTACTGTATGCTTGGAAGGAACATTGTTGGCTGGACGGGATCTAAGATTCATAAGCTTGTCAATGAGTGGATGCTTTTGTCTTGGTGCACTAGTGCTATCAGTCTTAAGCAGTAGATTTGGTTTGCAAGGCTGTTGGTTTGCCCTTGCCGGATTTCAGTGGGCTCGGTTTTCAATTGCCCTTTTGCGCCTTCTCTCTCCCAGTAGCGTTCTGTCCTCAGAAGATTTAAGCCAACATGAGCTGCAAAAGTTGAAGGCTACCTAG 1626 0.4557 MALKLSLPLPRTIHTPSLRNPNLISLPSSLSARNYNAALPSKSFHAASIRRRFGFRPARVAQGQELSGSSEDNDGMVVAVEEEGEKKELADQGIWSQVKEIVMFTGPATGLWLCGPIMSLMDTAVIGHGSSIELAALGPATVVCDYMSYMFMFLSIATSNMVATALANQDREEVQHHISVLLFVGLACGISMLLFTKVFGAAILTAFTGPKNAHVVPAANTYVQIRSLAWPALLSGWVAQSASLGMKDSWGPLKSLAAATVINGIGLVVLCRILGYGIAGAAWAAMISQVFSAYMMIQNLNKKGFDALALSIPSGKEFLNILGLAAPVFLTLMSKVAFYSLLIYNATSMGTHTMAAHQVMVQIYMTCTVWGEPLSQTAQSFMPGLIYGVNRNLAKAWLLLRSLVSIGAILGLLLGIVGTSIPWLFPYLFTPDQMVIQGMHKVLIPYFIALSVTPPTVCLEGTLLAGRDLRFISLSMSGCFCLGALVLSVLSSRFGLQGCWFALAGFQWARFSIALLRLLSPSSVLSSEDLSQHELQKLKAT* 542
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0792 541 PANTHER PROTEIN DETOXIFICATION 44, CHLOROPLASTIC-RELATED 69 530 IPR044644 -
Amo13g0792 541 PANTHER PROTEIN DETOXIFICATION 46, CHLOROPLASTIC 69 530 - -
Amo13g0792 541 Pfam MatE 116 263 IPR002528 GO:0015297|GO:0016020|GO:0042910|GO:0055085
Amo13g0792 541 CDD MATE_DinF_like 99 511 IPR044644 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0792 Amo-Chr13 9834750 9839193 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0792 K03327 - gmx:100778835 719.924
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0792 13 9834750 9839193 Amo13g0792 13 9834750 9839193 ECH