Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0791 ATGGCGTCTTCAGCAACTCACTTTCTCCATTTTCTTCGTTCACAACCACTGTCTTCATCTTCTTCATTCGTTTCGCTACTGAAACCGCTTCTTCTTTCCTCTCCCAATGTCTTATCCATGCATACTTCACCGCTTCTTCCACAAAACCTCTTCCCCTCCCTCACTCGCCACCACTTCTCTTCACCTTCCCTCTCTCTTCCTCACGCGCCTCCCCCTTTTGTGGCTCTCACGAGTTCATCACAAAACTCGGAGGAGGAAGATGACTACTACAACGACGAAGACGACGAAACGGAGCTGTACGATGAAGAATCTGACGACGACGATGATTTGGAATCGGAAAGGAGCAGTTTTGAGGAGAATACACAGATTGGTTCAGAATCGAATTCAACTTCGTCGCCATTGGAGAGGAAGAGGGAGGAGAGGTTGAAGGTGGAGGTTCCGAGTCTCAGCGTGAAGGAAAGGAAAGAACTTGCGTCTTACGCGCACAGTTTGGGGAAGAAGCTCAAGACCCAGTTGGTGGGAAAGTCCGGTGTTACCCCCAATGTTGCAACCTCTTTCATTGAGACACTTGAAGCCAATGAGCTTCTCAAGATTAAAATACATAGGAGTTGCCCTGGTGAGTTGGAAGATGTGGTGAAGCAGCTGGAAGAAGCAACCGGTTCAGTGGCAGTTGGTAAAATTGGTCGAACCCTGATTATATACAGGCCTAGTCTCACCAAATTGAAGGCCGAAGAAAAAAAGAAACAAGTTCGTCAACTCTTTCTTAAAAGACAATTAAAATACAGACAATTAAACAAGAGTAGGGAACAAGTACCAAAATTATCACGGCGTGGTTCATCTTCATCGTGGAAAGTGAGGAGTAGTAGGTCATAA 873 0.4605 MASSATHFLHFLRSQPLSSSSSFVSLLKPLLLSSPNVLSMHTSPLLPQNLFPSLTRHHFSSPSLSLPHAPPPFVALTSSSQNSEEEDDYYNDEDDETELYDEESDDDDDLESERSSFEENTQIGSESNSTSSPLERKREERLKVEVPSLSVKERKELASYAHSLGKKLKTQLVGKSGVTPNVATSFIETLEANELLKIKIHRSCPGELEDVVKQLEEATGSVAVGKIGRTLIIYRPSLTKLKAEEKKKQVRQLFLKRQLKYRQLNKSREQVPKLSRRGSSSSWKVRSSRS* 291
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0791 290 MobiDBLite consensus disorder prediction 117 131 - -
Amo13g0791 290 MobiDBLite consensus disorder prediction 85 114 - -
Amo13g0791 290 ProSiteProfiles CRM domain profile. 147 246 IPR001890 GO:0003723
Amo13g0791 290 Pfam CRS1 / YhbY (CRM) domain 150 235 IPR001890 GO:0003723
Amo13g0791 290 SMART CRS1_YhbY_2 149 235 IPR001890 GO:0003723
Amo13g0791 290 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 2 282 - -
Amo13g0791 290 MobiDBLite consensus disorder prediction 60 142 - -
Amo13g0791 290 Gene3D - 148 249 IPR035920 -
Amo13g0791 290 PANTHER CRS1/YHBY DOMAIN CONTAINING PROTEIN, EXPRESSED 2 282 - -
Amo13g0791 290 MobiDBLite consensus disorder prediction 265 290 - -
Amo13g0791 290 MobiDBLite consensus disorder prediction 274 290 - -
Amo13g0791 290 SUPERFAMILY YhbY-like 149 237 IPR035920 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0791 Amo-Chr13 9832222 9834361 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0791 K07574 - gmx:100779359 238.81
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0791 13 9832222 9834361 Amo13g0791 13 9832222 9834361 ECH