Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0772 ATGGCAACTGAGCAAGTCCTTCACATGAATGGAGGTACCGGAGAAACAAGCTACGCCAACAACTCTACGTTTCAAAAAAATGCAATACTCCGTACAAAACATATCATGGAAGAGTGTATAACCAAGTTGTATAGGACAACTTTACCAGAGTGTTTGAAAGTGGCGGATTTAGGGTGTTCATCAGGTCCAAATACACTTATGGTAGCATCTACCATTGTCAAAATTGTTGATGCCGTGAGTCAAACCTTGAATCAAGACCCACCCATGTTCCAGTTCTTCCTGAATGATCTATATGGCAATGATTTCAATACCATATTTAAGTCACTCCCTGATTTTTACAAGAGGATGGAAGACGAAATTGGTCACAAATTTGGACCATGTTTCATTAGTGGCACCCCTGGCACGTTTTATGGGAGACTCTTCCCCAACCATTCCATTCACTTCTTTCATTCTTCCAGCACCTTGCACTGGCTTTCTCAGATTCCGAAGGAGTTGAATAGTGAAGTAGAAGAGGCAATGAACAAAGGAGCAATATGTCCCACATCGGAGAGCCCTCCAGGAGTTCACAAAGCGTATAGTGAGCAATTTCAAAGAGACTTGAAGGTGTTCTTGCGATCACGTTCAGAAGAATTGATTCCTGGTGGTGCTATGGTCCTTGCTTTCATCATTTCAGACCAAAATCATAATATCAAAGGTTGGGAGGTATTTGGTGGTATATTCAACGACATGGTCTCAGAGCATATGGTTGAGAAGAGAAAGTTAGACTCATTCAACATATCATCATACTTTCCTACGGCCGAAGAGGTTAGGCAAGTAATTGAGGAAGAAGGATCCTTTAATATTCAAAGGATGGAGAAGACAATATATGATACGATGGAGAGTGTAATGGAGATTGGTAATGAGGATGAAGACACGTTCGCAGAGAGGCTTACCAAGACCATGAGAGCCGCAACCGAACCCATTTTTAAGGCAGAATTTGGGGAAGAAATTATGGACGAATATTTCACAAGGTTGCAAAGCAAAATCATCCAACTCCACAGAGTAGAGAGATTTAAGGGTGCTAATCTAATCAAAAATGCTATACTCCGTACGAAAGACGTGATGGAAGAGTGCATAATCAAATTGTATCGATCAACTTCACCAGAATGTTTGAAAGTGGCGGATTTAGGGTGCTCATCGGGTCCAAATACACTTATGGTAGCATCTACTACTGTCAAAGTAGTTGATGCCATGAGTCAAACCTTGAATCAAGACCCACCCATGTACCAATTTTTCCTGAATGATCTATATGGCAATGATTTCAATAACATATTTAAGTCACTCCCTGATTTTTACAAGAGGATGGAAGAGGAAATTGGTCACGAATTTGGACCATGTTTCATTAGTGGCACCCCTGGCACATTTTATGGGAGACTCTTCCCCAACCATTCCATTCACTTCTTTCATTCTTCCAGCACCTTGCACTGGCTTTCTCAGATTCCGAAGGAGTTGAATAGTGAAGTAGAAGAGCCAATGAACAAAGGAGCAATATGTCTCACAAAGGCAAGCCCTCCAGGAGTTCACAAAGCCTATAGTGAGCAATTTCAAAGAGACTTGAAGCTGTTCTTGCGATCACGTTCAGAAGAATTGATTCCGGGTGGTGCTATGGTCCTTGCTATGATCATTTTAGCCCAAAATCATAATACAATCAATGGTTGGGAGGTAATTGGTGCAATACTCAACAACATGGTCTCAGAGCACAAGGTTGAGAAGAGAAAGTTAGACTCATACAACATATCATCATACTTTCCTACGGCTGAAGAGGTTAGGCAAGTAATTGAAGAAGAAGGATCGTTTAACATTCAAAGGATGGAGAAGATAATATATGATATAGTGGAGAGCGTAATGGAGACTAGTAATGACGACTCTTTTATTCATGAGGATGAAGACGCAATTGGAGAGAGGCAAGCCAAGACCATAAGAGCCGTAAGTGAACCTATTTTGAAGGCAGAATTTGGGGAGGAAATTATGGATGAATTGTTCACAAGGTTCAAAAGCAAAATCATCCAACTCAACAGAGTAAAGAAATTGAAGGGTGCTACTCTAGTCGCCTACATGACAAAAGATACTTGA 2112 0.4096 MATEQVLHMNGGTGETSYANNSTFQKNAILRTKHIMEECITKLYRTTLPECLKVADLGCSSGPNTLMVASTIVKIVDAVSQTLNQDPPMFQFFLNDLYGNDFNTIFKSLPDFYKRMEDEIGHKFGPCFISGTPGTFYGRLFPNHSIHFFHSSSTLHWLSQIPKELNSEVEEAMNKGAICPTSESPPGVHKAYSEQFQRDLKVFLRSRSEELIPGGAMVLAFIISDQNHNIKGWEVFGGIFNDMVSEHMVEKRKLDSFNISSYFPTAEEVRQVIEEEGSFNIQRMEKTIYDTMESVMEIGNEDEDTFAERLTKTMRAATEPIFKAEFGEEIMDEYFTRLQSKIIQLHRVERFKGANLIKNAILRTKDVMEECIIKLYRSTSPECLKVADLGCSSGPNTLMVASTTVKVVDAMSQTLNQDPPMYQFFLNDLYGNDFNNIFKSLPDFYKRMEEEIGHEFGPCFISGTPGTFYGRLFPNHSIHFFHSSSTLHWLSQIPKELNSEVEEPMNKGAICLTKASPPGVHKAYSEQFQRDLKLFLRSRSEELIPGGAMVLAMIILAQNHNTINGWEVIGAILNNMVSEHKVEKRKLDSYNISSYFPTAEEVRQVIEEEGSFNIQRMEKIIYDIVESVMETSNDDSFIHEDEDAIGERQAKTIRAVSEPILKAEFGEEIMDELFTRFKSKIIQLNRVKKLKGATLVAYMTKDT* 704
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0772 703 Gene3D Vaccinia Virus protein VP39 21 290 IPR029063 -
Amo13g0772 703 PANTHER CARBOXYL METHYLTRANSFERASE, PUTATIVE-RELATED 1 344 - -
Amo13g0772 703 PANTHER CARBOXYL METHYLTRANSFERASE, PUTATIVE-RELATED 351 684 - -
Amo13g0772 703 Gene3D - 492 681 IPR042086 -
Amo13g0772 703 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 1 344 IPR005299 GO:0008168
Amo13g0772 703 PANTHER S-ADENOSYL-L-METHIONINE:CARBOXYL METHYLTRANSFERASE FAMILY PROTEIN 351 684 IPR005299 GO:0008168
Amo13g0772 703 Gene3D Vaccinia Virus protein VP39 357 623 IPR029063 -
Amo13g0772 703 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 356 701 IPR029063 -
Amo13g0772 703 Gene3D - 6 345 IPR042086 -
Amo13g0772 703 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 1 355 IPR029063 -
Amo13g0772 703 Pfam SAM dependent carboxyl methyltransferase 374 701 IPR005299 GO:0008168
Amo13g0772 703 Pfam SAM dependent carboxyl methyltransferase 40 347 IPR005299 GO:0008168
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0772 Amo-Chr13 9562143 9568519 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0772 - K21483 csv:101206474 548.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0772 13 9562143 9568519 Amo13g0772 13 9562143 9568519 ECH