Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0739 ATGGGGAAAGCGAAAGCCAAGGGGAAGCACCGTTTGGATCAGTATTACCACTTAGCAAAAGATCACGGTTACCGTTCCCGTGCTTCATGGAAGTTGATCCAACTCAACTCCAAGTACAACTTCCTCGAATCTGCCTCCGCCGTCCTCGACCTCTGCGCCGCCCCCGGAGGATGGATGCAGGTCGCCGTCAAGCACGTCCCCGTTGGCCACCTCGTCATCGGCGTCGACCTTGCGCCAATCGCCCCCATCCGCGGCGCCATCGCCATCCAGGAGGATATCACCAGGCCCGAGTGTAAGAGCCGCGTCAAGAAGCTCATGACCGATTACGGTTGCACCGCATTCGACGTCATACTCCACGACGGTTCTCCAAATATCGGAGGCGCTTGGGCGCAGGAAGCCATGTCCCAGAATGCCCTTGTCATCGATGCCGTTAAGCTCGCAACTCAGTTCTTGGCACCCAAGGGCACTTTCGTCACCAAGGTTTTTAGGTCGCAGGATTATAGTTCGGTGCTATTTTGCTTGAAGCAGTTGTTTGAGAAGGTTCAGGTGGAAAAGCCACCTGCTAGTCGTTCTGAGTCTGCTGAGATTTTTGTTTTGGGGTTGAAGTACAAGGCACCTGCTAAGATTGATCCACGGCTTCTCGATGTGAAGCATCTCTTTCAGGGGTCCGTTGAACCGCAGGCTAAGGTGGTGGATGTACTTAGAGAAAATAAGCAAAAGAGGCATCGTGATGGTTATGAAGATGGACTCTCAACTTTAAGGAAGGAGTCATCAGCTGCTAAATTCATTTGGTCAGATTCTCCTCTCGATATTCTTGGTTCAGTCACTTGCATAACCTTTACCGATCCAGCTGATAAACCAATCATGGATCATGAATTAACAACTGAAGAGGTGAAATCTCTGTGCGATGATTTGAGGGTTTTGGGGAAGCAAGACTTCAAGCATCTTCTAAAGTGGCGAATTCACATTAGAAAAGCTCTTGCACCCACTGAAAAGCCTGATCCCACTACCAAAGCAGAAGCCAAGAATGTTCCTGAGGTAGATGAAGATGATAGAATACTCAATGAAATGGAGGAGCTGACTTATACAATGGATCGCAAAAAGAAACGTGAAAAGAAGCTCCTTGCAAAAAGAAGAGCCAAGGACAAGGCACGAAAGGCAACAGGGATGCAAATGGATGCAATAGAAGATGGTTATGTTGATCAAGAGTTGTTTTCTCTTTCATCTATGAAGGGTAAGAAGGATCTTGTAGCTGTTGATACCACTGAGTATGAAGGGGCTGAGGATGAAGCAGAAGACAGTGAAGATGAAGCAACTCATGGAGGTGCGGAGCATTCTTCTGGCGACACAGAAGATTCTGATGAAGAACGTAAAAGATATGATGAACAAATGGATGATCTACTTGAACAAGCTTACGAGCGGTTTGTGGTAAAAAAGGGAGGGAGCACAAAGCAGTGGAAGCGTAGTAAGAAATCTGCTGATGTTGAGTCCCAACTTCTGGAGGATGGTGAGGATGATGATATTGTTCAGTCCAAATATGATTCCGATGAAGATCAGGGTGATCAAGAAGCAAATCCTTTGGTGGTTCCACTCAATGATGGGGCAGAGCCCACCCAAGAGGAAATAAAAAATAAATGGTTTAGTCAGGACTTATTTGCTGAAGCTGTAGAGGAGGGGGACTTCGGTAAAAATGATAGTGAAGATGAAATGGATATAGATGGGCCTAAAGAGAGTGTGCCCTTAACAAAAAAAAATAAAGAAAACAAAACAAAGGCTTCTGTGACCAAAGATCCCCCACAATCCCAACCATCCAAGAAAAAGGAGGATTTTGAGATAGTTCCCGCACCAGCTACTGATTCAAGTGATGATTCATCTTCTGATGAATCAGAGGAAGATGTTGAAACCAAAGCTGAGATATTGGCTTATGCTAAGAAGATGCTTAGGAAAAAGAAGCGGGAGGAGATACTGGATGATGCATATAATAAGTATATGTTTGACGATGAGGGATTGCCTAAGTGGTTTCTAGATGAGGAAAGGAGACACCGGCAACCAATAAAGCCTATCACCAAAGAGGAAATTGCTGCAATGAGAGCACAGTTTAAAGAAATCGATGCTCGGCCTGCAAAGAAGGTTGCGGAGGCCAAAGCTCGAAAGAAACGTGTTGCAACGAGGAAGCTTGAGAAGGTACGGAAGAAAGCAAATGCAATATCGGACCAGACAGAGATATCTGATCGTTCAAAGATGAAGCAAATCGACAAACTATATAAGAAGGCTGTTCCGAAGAGACCTAAAAAAGAGTATGTAGTTGCAAAGAAAGGTGTTCAAGTTAAGACTGGGAAGGGAAAAGTCCTTGTTGATCGGAGAATGAAGAAGGATGCTAGGAAACGTGGAATGGGAAAGGGAGGAAAAGGGGGTTCCAAGACGAAGGGCAAGGCCCCAAAGGGTAAGGGATCTGCAAAGGCCCCTGCCAAGAAGGGAAGAAAGGGGAATAAATGA 2496 0.4587 MGKAKAKGKHRLDQYYHLAKDHGYRSRASWKLIQLNSKYNFLESASAVLDLCAAPGGWMQVAVKHVPVGHLVIGVDLAPIAPIRGAIAIQEDITRPECKSRVKKLMTDYGCTAFDVILHDGSPNIGGAWAQEAMSQNALVIDAVKLATQFLAPKGTFVTKVFRSQDYSSVLFCLKQLFEKVQVEKPPASRSESAEIFVLGLKYKAPAKIDPRLLDVKHLFQGSVEPQAKVVDVLRENKQKRHRDGYEDGLSTLRKESSAAKFIWSDSPLDILGSVTCITFTDPADKPIMDHELTTEEVKSLCDDLRVLGKQDFKHLLKWRIHIRKALAPTEKPDPTTKAEAKNVPEVDEDDRILNEMEELTYTMDRKKKREKKLLAKRRAKDKARKATGMQMDAIEDGYVDQELFSLSSMKGKKDLVAVDTTEYEGAEDEAEDSEDEATHGGAEHSSGDTEDSDEERKRYDEQMDDLLEQAYERFVVKKGGSTKQWKRSKKSADVESQLLEDGEDDDIVQSKYDSDEDQGDQEANPLVVPLNDGAEPTQEEIKNKWFSQDLFAEAVEEGDFGKNDSEDEMDIDGPKESVPLTKKNKENKTKASVTKDPPQSQPSKKKEDFEIVPAPATDSSDDSSSDESEEDVETKAEILAYAKKMLRKKKREEILDDAYNKYMFDDEGLPKWFLDEERRHRQPIKPITKEEIAAMRAQFKEIDARPAKKVAEAKARKKRVATRKLEKVRKKANAISDQTEISDRSKMKQIDKLYKKAVPKRPKKEYVVAKKGVQVKTGKGKVLVDRRMKKDARKRGMGKGGKGGSKTKGKAPKGKGSAKAPAKKGRKGNK* 832
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0739 831 Gene3D Vaccinia Virus protein VP39 21 210 IPR029063 -
Amo13g0739 831 MobiDBLite consensus disorder prediction 422 465 - -
Amo13g0739 831 Coils Coil 450 470 - -
Amo13g0739 831 PANTHER RIBOSOMAL RNA METHYLTRANSFERASE 5 804 - -
Amo13g0739 831 Hamap Ribosomal RNA large subunit methyltransferase E [rlmE]. 8 204 IPR015507 GO:0001510|GO:0008168
Amo13g0739 831 Pfam Spb1 C-terminal domain 605 796 IPR012920 GO:0005634|GO:0006364|GO:0008168
Amo13g0739 831 MobiDBLite consensus disorder prediction 771 831 - -
Amo13g0739 831 PANTHER RRNA METHYLTRANSFERASE-RELATED 5 804 - -
Amo13g0739 831 MobiDBLite consensus disorder prediction 422 437 - -
Amo13g0739 831 Pfam Domain of unknown function (DUF3381) 237 385 IPR024576 -
Amo13g0739 831 Coils Coil 417 437 - -
Amo13g0739 831 Coils Coil 719 739 - -
Amo13g0739 831 MobiDBLite consensus disorder prediction 568 593 - -
Amo13g0739 831 MobiDBLite consensus disorder prediction 438 465 - -
Amo13g0739 831 MobiDBLite consensus disorder prediction 479 635 - -
Amo13g0739 831 Pfam FtsJ-like methyltransferase 24 202 IPR002877 GO:0008168|GO:0032259
Amo13g0739 831 SUPERFAMILY S-adenosyl-L-methionine-dependent methyltransferases 23 204 IPR029063 -
Amo13g0739 831 MobiDBLite consensus disorder prediction 793 831 - -
Amo13g0739 831 Hamap AdoMet-dependent rRNA methyltransferase <gene_name> [SPB1]. 1 803 IPR028589 GO:0008649|GO:0031167
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0739 K14857 - gmx:100790741 1224.54
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0739 13 9124480 9130057 Amo13g0739 13 9124480 9130057 ECH