Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0737 ATGAATTCCGATGGCACCACCACCACCGGCGGCGGCGGCGGAGACGTTCAGATCCACCAAACTCGGATTCTACCGGATTTTCTCCAGAGCGTGAATCTCAAATACGTGAAACTTGGATACCACTACCTAATCACTCACCTCTTAACCCTCTGCTTGATTCCTCTCATGTCAATCATTATAATCCAAGCATCTCAGATGAACCCTAACGACCTTCACCACTTATGGCTCCACCTTCAGTACAATCTCGTCAGCGTCATAATCTGCTCCGCGATCCTCGTTTTTGGATCCACCGTTTACATCATGACAAGGCCAAGATCCGTTTACCTCGTTGATTATTCGTGTTACAAGCCACCTTCGAATCTCAGCGTCAAGTTCACTCAGTTCATGGAACATTCTAAGCTCACCGGTGATTTCTCTGACGATTCTCTTGATTTCCAGAGGAAGATTCTAGAACGTTCTGGTCTTGGTGAGGAGACTTATGTACCCGAAGCCATGCATCATATCCCTCCAACTCCTTCCATGGCTGCTGCAAGAGAAGAAGCTGAGAATGTTATGTTTGGTGCTTTGGATAATCTCTTTGCTAATACAAAGATTAAGCCTAAGGATATTGGTGTTCTTGTTGTGAATTGCAGTTTGTTTAACCCAACTCCTTCACTTTCTGCAATGATTGTGAACAAGTACAAGCTTAGGGGTAACATTAGAAGCTTCAATTTGGGTGGTATGGGTTGTAGTGCAGGAGTTATAGCCATTGATCTTGCTAAGGACATGCTTCAAGTTCATAGGAACACTTATGCTGTTGTTGTTAGCACTGAGAACATTACTCAGAATTGGTACTTTGGGAACAAGAAATCTATGCTGATCCCAAATTGTTTGTTCCGTGTTGGTGGTTCTGCTGTTTTGTTGTCCAACAAAGGCTCTGATAAGAGAAGAGCAAAGTACAAGCTTGTTCATGTTGTGAGGACTCATAAGGGTGCTGATGATAAAGCTTTCAGGTGTGTGTATCAAGAACAAGACGATGATGGCAAAACTGGTGTTTCTCTCTCAAAGGATCTTATGGCTATTGCTGGTGGGGCTTTGAAGACTAACATCACAACTTTGGGGCCTCTTGTTCTTCCAATAAGTGAACAGCTTCTGTTCTTTGCTACTTTGGTTGTTAAGAAGCTTCTGAATGCAAAAGTGAAGCCTTATATACCTGATTTCAAGCTTGCATTTGATCATTTCTGCATTCATGCTGGTGGTAGAGCTGTGATTGATGAGCTTGAGAAGAATCTTCAGCTTCTTCCTATGCATGTTGAGGCTTCTAGAATGACACTTCACAGATTTGGGAACACTTCTTCAAGCTCTATTTGGTATGAGCTGGCATACACTGAAGCCAAGGGAAGAATGAGGAAGGGGAATAGGGTGTGGCAGATTGCATTTGGAAGTGGATTTAAGTGTAACAGTGCAGTGTGGCAGGCACTTAGGCATGTCAAGGCTTCACCTAAGTCTCCTTGGGAAGATTGCATTCATAGGTATCCAGTTCAGGTTGTTACATAG 1536 0.4342 MNSDGTTTTGGGGGDVQIHQTRILPDFLQSVNLKYVKLGYHYLITHLLTLCLIPLMSIIIIQASQMNPNDLHHLWLHLQYNLVSVIICSAILVFGSTVYIMTRPRSVYLVDYSCYKPPSNLSVKFTQFMEHSKLTGDFSDDSLDFQRKILERSGLGEETYVPEAMHHIPPTPSMAAAREEAENVMFGALDNLFANTKIKPKDIGVLVVNCSLFNPTPSLSAMIVNKYKLRGNIRSFNLGGMGCSAGVIAIDLAKDMLQVHRNTYAVVVSTENITQNWYFGNKKSMLIPNCLFRVGGSAVLLSNKGSDKRRAKYKLVHVVRTHKGADDKAFRCVYQEQDDDGKTGVSLSKDLMAIAGGALKTNITTLGPLVLPISEQLLFFATLVVKKLLNAKVKPYIPDFKLAFDHFCIHAGGRAVIDELEKNLQLLPMHVEASRMTLHRFGNTSSSSIWYELAYTEAKGRMRKGNRVWQIAFGSGFKCNSAVWQALRHVKASPKSPWEDCIHRYPVQVVT* 512
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0737 511 CDD CHS_like 89 484 - -
Amo13g0737 511 PIRSF Very_long_ch_3-ktacl-CoA_syn 26 511 IPR012392 GO:0006633|GO:0016020|GO:0016747
Amo13g0737 511 SUPERFAMILY Thiolase-like 316 485 IPR016039 GO:0016746
Amo13g0737 511 PANTHER 3-KETOACYL-COA SYNTHASE 14 510 IPR012392 GO:0006633|GO:0016020|GO:0016747
Amo13g0737 511 Pfam FAE1/Type III polyketide synthase-like protein 99 388 IPR013601 GO:0006633|GO:0016020|GO:0016747
Amo13g0737 511 SUPERFAMILY Thiolase-like 93 310 IPR016039 GO:0016746
Amo13g0737 511 Pfam 3-Oxoacyl-[acyl-carrier-protein (ACP)] synthase III C terminal 404 485 IPR013747 -
Amo13g0737 511 PANTHER 3-KETOACYL-COA SYNTHASE 4 14 510 - -
Amo13g0737 511 Gene3D - 121 486 IPR016039 GO:0016746
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0737 Amo-Chr13 9100044 9102361 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0737 17 509 Miscellaneous Gene Families AT1G19440 85.193 0.0 901
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0737 K15397 - zju:107403629 913.294
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0737 13 9100044 9102361 Amo13g0737 13 9100044 9102361 ECH