Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0682 ATGATTGGACGCAGAGAAGGAGCATTGATGAGGAACAACGGTTCCCATTCTCTTTGGAAATCGAAAGTTGTAACCGCCGTAGCAATTGGGGTCCTCATTGGTTGCGTCTTCGCGTTCTTGTTCCCAAATGGTTTCTTCTACTCTGTTCCCACTTCAACCCCAAATCGCCACCTTTCTCTTGCCGGATCCAAAACCCAGGAAAATCCAGCTGAATGTGAATCCTCTGATCGGCTCAACATGTTGAAATCAGAGTTGGTGGCAGTATCAGATAAAAATGCTGAGCTGAAAAAACAGGTGAGGGAATTGACAGAGAGGCTGCGGTTTGCGGAGCAAGGGAAAGATCAGGCTCAAAAGCAGTTTCTTGCATTGGGTAAACAGCAAAAAGCTGGACCTTTTGGTACCGTCAAGGGATTAAGAACTAACCCTACTGTTGTTCCTGATGAATCCGTGAACCCAAGGTTGGCAAAGCTATTACAGAAAATCGCAGTTAAACAAGAGCTTATAGTTGCGCTTGCAAACAGAAATGTGAAGGAAATGCTGGAGGTCTGGTTCACCAACATCAAGAGAGTAAACATAACCAATTATCTGGTTGTTGCTTTAGATGAAGAGATTGAACAGTTCTGCCAATCAAATCAAGTCCCAGTGTATAAGAGAGATCCGGATGCAGCTGTTGATAACATTGGAAAGACAGGAGGGAACCATAAAGTCTCAGGGCTTAAATTCCGTATTCTAAGAGAATTTTTGCAGTTGGGGTATGGTGTTCTTCTATCAGATGTGGACATTGTATATTTGCAAAATCCCTTCGATCATCTATATCGGGATTCAGATGTGGAGTCCATGAGTGATGGCCATGATAACAGGACGGCTTACGGTTATAACGATGTCTTTGATGAACCTGCAATGGGTTGGGCTCGATATGCACATACCATGAGGATATGGGTGTATAACTCTGGTTTCTTCTATATCAGACCAACAATTCCCTCCATTGAACTTTTGGATCGTGTGGCAACTCGACTTTCCCAGGAGGATGCATGGGACCAGGCAGTTTTCAACGAGGAGCTCTTTTTCCCCTCGCATCCAGGCTATGAAGGGCTACATGCTGCAAGAAGAACTATGGATATGTATCTGTTCATGAACAGCAAGGTTCTTTTCAAGACAGTGAGGAATGATGCTAAGCTAAGCAAGTTGAAACCGGTAATTGTTCATGTGAATTACCACCCTGATAAGCTTCCGCGAATGAAAGCAGTTGTCGAATTCTATGTCAACGGGAAGCAGGATGCTCTCAAAGCTTTCCCTGAAGGCTCAAATTGGTAA 1314 0.4406 MIGRREGALMRNNGSHSLWKSKVVTAVAIGVLIGCVFAFLFPNGFFYSVPTSTPNRHLSLAGSKTQENPAECESSDRLNMLKSELVAVSDKNAELKKQVRELTERLRFAEQGKDQAQKQFLALGKQQKAGPFGTVKGLRTNPTVVPDESVNPRLAKLLQKIAVKQELIVALANRNVKEMLEVWFTNIKRVNITNYLVVALDEEIEQFCQSNQVPVYKRDPDAAVDNIGKTGGNHKVSGLKFRILREFLQLGYGVLLSDVDIVYLQNPFDHLYRDSDVESMSDGHDNRTAYGYNDVFDEPAMGWARYAHTMRIWVYNSGFFYIRPTIPSIELLDRVATRLSQEDAWDQAVFNEELFFPSHPGYEGLHAARRTMDMYLFMNSKVLFKTVRNDAKLSKLKPVIVHVNYHPDKLPRMKAVVEFYVNGKQDALKAFPEGSNW* 438
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0682 437 PANTHER GLYCOSYLTRANSFERASE 1 436 - -
Amo13g0682 437 Coils Coil 78 119 - -
Amo13g0682 437 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 35 - -
Amo13g0682 437 PANTHER ARABINOSYLTRANSFERASE RRA3 1 436 IPR044290 GO:0016757|GO:0080147
Amo13g0682 437 Pfam Nucleotide-diphospho-sugar transferase 192 410 IPR005069 -
Amo13g0682 437 SUPERFAMILY Nucleotide-diphospho-sugar transferases 168 367 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0682 Amo-Chr13 8329572 8332235 Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0682 K20783 - gmx:100804189 757.673
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0682 13 8329572 8332235 Amo13g0682 13 8329572 8332235 ECH