Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0674 ATGAAGACACTCAGTCCCTTAAACTCCTCGAATCCATGTCTCCTCAAGACCCATTTCCTCAAAGTTCCCATCTTTAACCCCATTTTCAAGTTCAAGCCATTGCCACACAACACCCACCATGCAAGGATAGCCAAAGTTCCCTCATTTACCATAAACTCTAAGCTAAAAAGCTCTCAGGATATCAATAACAAAGGGAAGAAGAGCGTTTCCCAGAAGATTGTGCTATCAGAAACTTCGCCTCCTCCACTTGCAGTTGATAAAGATGACATCAATGGTGGCAGTGGCAATGAGAGTGTCCCAGTTAGCTCAAAGAAAAAAGGAGGGGTTTCTGGGTTGGCCAAGAAGTTGAGCAAAAAGGTGTTGCAGATTCTCTCTAATTTGTCTTTGGCTATTGGAGAAATGTTCACCATTGCAGCTTTAATGGCTTTAGGAACTGTTATTGAACAAGGTGAGGCCCCTGATTTTTACTTCAAAAATTACCCTGAAGATCATCCTGTGTTGGGTTTTTTTACTTGGAGATGGGTTCTCACCCTTGGCTTTGATCACATGTTTACATCCCCTGTATTCATTGGAATGTTGGCTCTCCTTGGTGCATCTCTGATGGCCTGCACTTACACGACACAGATTCCGCTCGTCAAGGTTTCGAGAAGATGGGCATTTTTGCATTCTGCTGAGGCTATTCGTAAGCAAGAATTTTCAGATACGTTGACAAGAGCATCAATTGAAGATGTTGGTACTCTATTGATGGGAGCTGGATATGAGGTATTCTTGAAAGGACCATGTTTATATGCTTTTCAAGGGCTTGCCGGTCGGCTGGCCCCTATAGGAGTCCATATATCACTGCTGCTGATAATGGTTGGAGGAACTCTAAGTGCTGCTGGGAGCTTCAAAGGTTCAGTCACGGTGCCGCAAGGGCTGAATTTTGTTGTAGGAGATGTTCTTGGTCCTACTGGTTTTCTGTCCACTCCCACTGAAGCTTTTAATACAGAGATTCATGTCAACAGATTTTACATGGATTATTTTGAAAGTGGAGAGGTTTCGCAGTTCCACACTGATCTTTCCCTCCTTGACATGGATGGGAAAGAAGTAATGAGAAAAACAATTAGTGTAAATGATCCTTTAAGATATGGTGGCATCACTATATATCAGACAGATTGGAGTATTTCAGCACTTCAAATTCTTAAGGACAATGAAGGACCTTATAACTTGGCTATGGCCCCTCTACAGATCAATGGGGACAAGAAACTTTTTGGAACTTTCCTACCTGTTGGAGATATCAACTCTCCTGATGTTAAGGGAATATCTATGCTTGCGCGTGATCTGCAGTCAATTGTCCTTTATGATAAGGAAGGGAAATTTGCAGGAGTTAGAAGGCCTAATTCAAAGCTCCCAATCAATATTGATGGCTCAGAAATTGTGATTCTTGATGCAATAGGGAGCAGTGGCTTGGACTTGAAGACTGACCCGGGAGTTCCAACTGTTTATGCTGGATTTGGTGCTCTCATGCTCACTACTTGCATTAGCTACTTATCTCATTCACAGATATGGGCCATACAAGATGGAACAAGTGTGATTATTGGAGGGAAGACTAATAGAGCAAAGATGGAGTTCCCTGAAGAGATGAACCGTTTGCTTGATAAGGTTCCTGAAATAGTTGAATCTTCTTCATCTCAGCAAGTTGACACCATTACTAGTGGCTAG 1701 0.425 MKTLSPLNSSNPCLLKTHFLKVPIFNPIFKFKPLPHNTHHARIAKVPSFTINSKLKSSQDINNKGKKSVSQKIVLSETSPPPLAVDKDDINGGSGNESVPVSSKKKGGVSGLAKKLSKKVLQILSNLSLAIGEMFTIAALMALGTVIEQGEAPDFYFKNYPEDHPVLGFFTWRWVLTLGFDHMFTSPVFIGMLALLGASLMACTYTTQIPLVKVSRRWAFLHSAEAIRKQEFSDTLTRASIEDVGTLLMGAGYEVFLKGPCLYAFQGLAGRLAPIGVHISLLLIMVGGTLSAAGSFKGSVTVPQGLNFVVGDVLGPTGFLSTPTEAFNTEIHVNRFYMDYFESGEVSQFHTDLSLLDMDGKEVMRKTISVNDPLRYGGITIYQTDWSISALQILKDNEGPYNLAMAPLQINGDKKLFGTFLPVGDINSPDVKGISMLARDLQSIVLYDKEGKFAGVRRPNSKLPINIDGSEIVILDAIGSSGLDLKTDPGVPTVYAGFGALMLTTCISYLSHSQIWAIQDGTSVIIGGKTNRAKMEFPEEMNRLLDKVPEIVESSSSQQVDTITSG* 567
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0674 566 MobiDBLite consensus disorder prediction 79 108 - -
Amo13g0674 566 Hamap Cytochrome c biogenesis protein Ccs1 [ccs1]. 117 546 IPR023494 -
Amo13g0674 566 PANTHER CYTOCHROME C BIOGENESIS PROTEIN CCS1, CHLOROPLASTIC 80 556 IPR023494 -
Amo13g0674 566 Pfam ResB-like family 128 393 IPR007816 -
Amo13g0674 566 Pfam ResB-like family 429 541 IPR007816 -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0674 11 557 Miscellaneous Gene Families AT1G49380 67.031 0.0 758
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0674 K07399 - gmx:100807003 921.383
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0674 13 8246691 8254458 Amo13g0674 13 8246691 8254458 ECH