Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0668 ATGAAAAATAGAGCCATGGAAGAAGAACAAGTAGATAACATCATTCAACCTTCTTATCACCCTAAAATGGAACTGGGAGAACTCAAGCAAAGCATTGAATCCAAGAAGAGGCAATACCATAATATGGATCTTCAAAGTTCTTTGACTCAAGAGATTCTGCAGCTTCAAAAACGATTGCAGCAACAATTTGTGATAAGGCGTGCATTAGAGAAAGCATGTTACCTACCTTATTCACAGGATGCTACATTAGAAAATTCAATACCTAAGGCTGCCAAAGAACTGATTAAGGAGATTGGAATATTGGAATTAGAAGTTGTGTATTTGGAACAACACTTGCTATCTTTGTATAGGAGAAGATTTGATCAACAAATTACAACTCTATCAACCAAGGAAAGAAGATTGGAAACAGCTTCTGACATTGAAAGAGGAACTGTTGAAGGTGCTACCTCAGAAAAGGAAGCTACAGTTATGCAATATAGTAACATTTCACCCAGTAATAATAATTCAACTAACTGTGAGGTCAAGGAATATTACAACCAGCTGGTACCTGATACCGTTTTAGGCTCTAGCGTTCATCGATGTCACTCAGAACTATCTCAGCGATCGGTATGCTTAGTTGAAGCTTCTCCTGAGCACATTAAGAGCAAAACTCTAGACAATTACCATTCTCTGCCATTATCCATGCTAGAACAAGCTCAGTGTGCTAAATCCAGTTCAACCAGCCTGGGAGAGCATCTGGGGAATTTCTATGTTGATAATGTTCCAGAGACGCCGAATTGGCTTTCTGAAGAGATGATTAAGTGCATATCCGCCATATATTGTGAACTTTCAGAGCCATCTTCTCTTGGTCTTAAAAATGTTTCATCCTCTATTTCATTTTCATCATCTGGTTATGAACTTTCTTCAGAGAGCCAGAGTAGTAAGTTGGGATCGCAGTGGAAGAAGCGTTCCTCCTTCAATTTGAACTCCACTAACCCTTTCCATGTCAAAGGATCAAAAGAATTTAGTGAACCTTACTGTTCAATGGTAAGGATTCAGCAACTATGTACAGATGATCAGAAACTAAAAGAGATTGAATACATGCTACGGAGATTCAGGTCACTTGTTTCTCGGCTGGACGAAGTTAATCCTAGAAACCTGAGGCATGAAGAGAACCTAGCCTTTTGGATTAATGTGCACAATGCATTAGCAATGCATGCCTTATTAGTATATGGAGTTTCAGCCAATAATGTTAAAAGAATGTCTACAGTACTTAAGGCTGCATATAACATTGGGGGTTATACTATAAGCTTAGACCAGATACAAGACTTCATTTTAGGGTGCAGATTGCCTCGTCCAGGACAATGGCTGCGGCTGTGGTTTCCATCAAAGACAAAATCCAAGGTTAGAGATGCAAGAAAAGGATTCGCCATACGTCGTCCAGAACCTTTGTTAATATTTGCGCTTTGCTCGGGAAGCCATTCTGATCCTGCGCTACATGTGTACACACCGAAGAGAGTCCTTGAGGAGCTAGAATCTGCAAAAGAAGAATACATTCTGTCCACTACCAGCATAACCAAGGAACAGAAAATAGTAGTCCCGAAAATAGTCGAGTCTTTTGCAAAGAGTTCAGGTCTGGGAGCATTTGATTTGATGGAGATGGTTAAGCCTTATTTACCTGATTCTCAGAGGAAAAGCATTAGGGAGTTTCAGTCTAAAACAAGCTGGAAAGGCATTGAATTAGCCCCTCATAACTTCACTTTCCATTATCTATTGTCAAAGGAACTAGGTTAG 1773 0.3971 MKNRAMEEEQVDNIIQPSYHPKMELGELKQSIESKKRQYHNMDLQSSLTQEILQLQKRLQQQFVIRRALEKACYLPYSQDATLENSIPKAAKELIKEIGILELEVVYLEQHLLSLYRRRFDQQITTLSTKERRLETASDIERGTVEGATSEKEATVMQYSNISPSNNNSTNCEVKEYYNQLVPDTVLGSSVHRCHSELSQRSVCLVEASPEHIKSKTLDNYHSLPLSMLEQAQCAKSSSTSLGEHLGNFYVDNVPETPNWLSEEMIKCISAIYCELSEPSSLGLKNVSSSISFSSSGYELSSESQSSKLGSQWKKRSSFNLNSTNPFHVKGSKEFSEPYCSMVRIQQLCTDDQKLKEIEYMLRRFRSLVSRLDEVNPRNLRHEENLAFWINVHNALAMHALLVYGVSANNVKRMSTVLKAAYNIGGYTISLDQIQDFILGCRLPRPGQWLRLWFPSKTKSKVRDARKGFAIRRPEPLLIFALCSGSHSDPALHVYTPKRVLEELESAKEEYILSTTSITKEQKIVVPKIVESFAKSSGLGAFDLMEMVKPYLPDSQRKSIREFQSKTSWKGIELAPHNFTFHYLLSKELG* 591
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0668 590 PANTHER UNCHARACTERIZED 7 589 - -
Amo13g0668 590 Pfam Leucine-zipper of ternary complex factor MIP1 43 122 IPR025757 -
Amo13g0668 590 PANTHER TERNARY COMPLEX FACTOR MIP1 LEUCINE-ZIPPER PROTEIN 7 589 - -
Amo13g0668 590 Pfam Protein of unknown function, DUF547 377 512 IPR006869 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0668 Amo-Chr13 8207783 8211220 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0668 - - aip:107628929 1105.12
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0668 13 8207783 8211220 Amo13g0668 13 8207783 8211220 ECH