Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0658 ATGCATTCGGCCATTGATGTGGTGGAGGAAGGAAGAGAAGCTAGTCATGATAAGCCTTCAGCAGGTCCAGTGTACAGATGCATCTATGCCAAAGATTCTCTTCTTCACTTGCCACCTCACTTGGATTCTCCATGGCAATTCTTCAGGGACTCTGCAAGCAAGTACCCCAGCAAGGCAATGCTGGGTCGTCGTCAGAAATCTGAATCAGAGGTTGATCCATATAAATGGCTGACATATCAGGAGGCTTATGAAACAGCTATCAGAATTGGTTCAGCCATGAGTAGCCGTGGTGTCAACCCTGGTGATCATTGTGGGATATATGGAATTAACTGTCCAGAATGGATAATTACAATGGAGGCTTGTAATAGCCATTCAGTAACATATGTCCCATTATATGACACACTTGGTCCAAATGCAGTGGAGTTTATCATAAACCATGCTCAAGTTTCAATAGCATTTGTACAGGAAAACAAGATTCCTTCTATTTTGTCTTGTCTTGGGCAGTGTTCTTCAAATCTCAAAACTATTGTGAGTTTTGGTAATGTTTTGACCGCGCAAAAGAAGGTAGCTGAGGAACATGGTACATCCTGCTTCTCTTGGGAAGAGTTTCTCCAGTTGGGGAACTTGGATTGTGATCTACCACCAAAAAAGAAGACTGACATCTGTACAATCATGTACACAAGTGGAACAACAGGAGAACCGAAAGGTGTCATAATTAAGAATGAGGCTTTCATGGCTGAAGTTTTGTCTATTGATCAAATACTTCATTTAACAGACAAAGCAGCAAGCGAAGATGATGTGTACTTCTCTTTTCTTCCTCTTGCTCATGTCTATGACCAGATAATGGAGACCTATTGCATTTATAGGGGAGCCTCAATTGGATTCTGGCAAGGCGATGTGAGGTACTTAATGGAGGATGTTCAGGTGTTGAAGCCAACTATATTTTGTGGCGTTCCTAGAGTTTTCGACCGTGTTTATGCCGGTATCAACAGCAAAATTTCATCCGGAGGAGCGTTGCGAAGTGCATTGTTTCAGTATGCATATAATTACAAGTTGGGATACTTAGAGAAGGGTCTTCCACAAGACAAAGCAGCACCATTTTTTGATAGGCTTGTATTTGATAAGATAAAACAAGGCTTAGGTGGAAGAGTTCGGCTTCTGTTATCCGGCGCTGCTCCTCTGCCTCGGCACATTGAGGAGTTTCTAAGGATCACTAGTGGAGCTACTTTGGCACAAGGATATGGTCTTACTGAAAGTTGTGGAGGATGTTTCACAGCATTAGGCAATGTGTTTTCCATGATGGGAACAGTTGGAGTTCCTATGACAACAATTGAGGCCAGGCTTGAATCCGTGCCGGAGATGGGATATGATGCACTTTCCAGTGAACCTCGTGGCGAAATATGCCTTAGAGGGACTACCTTGTTCTCAGGTTACCATAAGCGTGAAGATCTTACAGAAGAGGTCATGGTTGATGGCTGGTTTCACACAGGTGACATTGGAGAATGGCAGCCTAATGGAGCTATGAAAATCATAGATAGGAAAAAGAATATCTTTAAATTGTCTCAAGGAGAATATGTTTCTGTAGAAAATATCGAAAACAAGTATCTGCGATGCCCTCTTATAACATCGATTTGGGTCTATGGAAACAGTTTTGAGTCATTCTTGGTGGCTGTGGTGGTGCCAGATAGAAAAGCCCTTGAAGATTGGGCAGTGAAGCATAATTCATCAACAGATGACTTTAAATCTTTATGTGAGAATTTGAAGGCAAGAAAATACATCTTAGATGAGCTCAACAGCACTGGTCAGAAACACCAACTTAGAGGCTTCGAGATGCTAAAGGCAATTCATCTGGAACCAGCTCCCTTTGACATGGAGAGAGATCTAATAACTCCAACATTCAAATTGAAGAGACCACAATTACTCAAGTACTATAAGGATTGTATTGAGGAGCTATACAAAGAAGCCAAGGGAACCAAGGTGTGA 1983 0.4211 MHSAIDVVEEGREASHDKPSAGPVYRCIYAKDSLLHLPPHLDSPWQFFRDSASKYPSKAMLGRRQKSESEVDPYKWLTYQEAYETAIRIGSAMSSRGVNPGDHCGIYGINCPEWIITMEACNSHSVTYVPLYDTLGPNAVEFIINHAQVSIAFVQENKIPSILSCLGQCSSNLKTIVSFGNVLTAQKKVAEEHGTSCFSWEEFLQLGNLDCDLPPKKKTDICTIMYTSGTTGEPKGVIIKNEAFMAEVLSIDQILHLTDKAASEDDVYFSFLPLAHVYDQIMETYCIYRGASIGFWQGDVRYLMEDVQVLKPTIFCGVPRVFDRVYAGINSKISSGGALRSALFQYAYNYKLGYLEKGLPQDKAAPFFDRLVFDKIKQGLGGRVRLLLSGAAPLPRHIEEFLRITSGATLAQGYGLTESCGGCFTALGNVFSMMGTVGVPMTTIEARLESVPEMGYDALSSEPRGEICLRGTTLFSGYHKREDLTEEVMVDGWFHTGDIGEWQPNGAMKIIDRKKNIFKLSQGEYVSVENIENKYLRCPLITSIWVYGNSFESFLVAVVVPDRKALEDWAVKHNSSTDDFKSLCENLKARKYILDELNSTGQKHQLRGFEMLKAIHLEPAPFDMERDLITPTFKLKRPQLLKYYKDCIEELYKEAKGTKV* 661
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0658 660 Pfam AMP-binding enzyme 48 521 IPR000873 -
Amo13g0658 660 ProSitePatterns Putative AMP-binding domain signature. 224 235 IPR020845 -
Amo13g0658 660 Pfam AMP-binding enzyme C-terminal domain 531 573 IPR025110 -
Amo13g0658 660 PANTHER LONG-CHAIN-FATTY-ACID--COA LIGASE 8 656 - -
Amo13g0658 660 PANTHER LONG-CHAIN FATTY ACYL COA LIGASE 8 656 - -
Amo13g0658 660 CDD LC-FACS_euk 73 653 IPR045311 GO:0004467|GO:0006631
Amo13g0658 660 SUPERFAMILY Acetyl-CoA synthetase-like 35 653 - -
Amo13g0658 660 Gene3D - 39 513 IPR042099 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0658 Amo-Chr13 8123006 8128195 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0658 8 656 Acyl Lipid Metabolism Gene Families AT1G64400 55.300 0.0 782
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0658 K01897 - gmx:100790068 1142.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0658 13 8123006 8128195 Amo13g0658 13 8123006 8128195 ECH