Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0657 ATGTTGAAAAAGCCAGCTGTAATTATTATTGCCACCACCTATAATATCTATAACTGTTTGACTTTTCCATTCATAAAATTTCTTCTTGATTTGATTCAAAAGGATATGTGGAAGGGATCAATGGCTTTTCAAGATGAAGCAGCAGCAAAATTGCTTAGCTCTGATCTCATGGAGCTGAGTTTGGCTGTTCACAAGCTTGCTGATCATGCCATCAAGCTTGGTGGTTTAGGCTTTGGAGCTTCCTTTTTTGGATTGATTGCTGCCATTGCTGCTATTTACTTGTTGATTTTGGACCGTACAAATTGGAAGACAAACATTCTTACAGCACTACTCATTCCATATATTTTTTTCAGCCTGCCTTCAATTATTTTTGGTGTATTCAGGGGAGAAATTGGAAAATGGATTGCCATTATTGCTGTTGTTCTAAGGCTTTTCCTTCCAAAACACTTCCCTGATTGGTTGGAACTGCCTGCTGCATTGATTCTTCTTATTGTTGTTGCACCATCTCTAATTGCAAGCACTTTCAGAAACAACATTGTTGGTGTGGTAGTATGCCTAATCATAGCATGTTATTTGCTGCAAGAACACATTAGAGCCTCTGGTGGATTCAGAAACTCTTTCACCAAAGCCCATGGCATATCCAATTCTGTTGGCATAATCCTTCTCTTGGTTTATCCCATTTGGGCCCTGGTGGTTATCCTCTTTTAG 708 0.3912 MLKKPAVIIIATTYNIYNCLTFPFIKFLLDLIQKDMWKGSMAFQDEAAAKLLSSDLMELSLAVHKLADHAIKLGGLGFGASFFGLIAAIAAIYLLILDRTNWKTNILTALLIPYIFFSLPSIIFGVFRGEIGKWIAIIAVVLRLFLPKHFPDWLELPAALILLIVVAPSLIASTFRNNIVGVVVCLIIACYLLQEHIRASGGFRNSFTKAHGISNSVGIILLLVYPIWALVVILF* 236
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0657 235 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 2 44 234 IPR008892 GO:0016021
Amo13g0657 235 PANTHER COLD-REGULATED 413 PLASMA MEMBRANE PROTEIN 1-RELATED 44 234 - -
Amo13g0657 235 Pfam Cold acclimation protein WCOR413 43 222 IPR008892 GO:0016021
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0657 Amo-Chr13 8121010 8122624 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0657 - - gmx:100811430 270.396
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0657 13 8121010 8122624 Amo13g0657 13 8121010 8122624 ECH