Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0654 ATGGCTTCTCTTCTGAAGAAACTAAGACCTGGGGTCCCTTCAGTGGTTGTTGATGATGGTGGTGGTTGTGATAGCAATTTCGAATTCTCCATTGCCGAGGAGTACAAAGGTCCTCCATTGAGTTACTTCATCCCTGAGGTACCTGCTTTCAAGCTTGACCAAGTCCCAGTTGCTCCTATAGCTTCTTCTCCACCTCATCATCAATCCTCATTAGTAGTCCCAGTTATCCAACCTATCAGAAAATCAAGCAATGCTACAACGAAGCTTAAAGATGGTGGTAATGAAGATCATAAACATGGTGTTGTAGGATTGAATCTCATTTCCAAGAATTCAGATACGGCAGAAGAATCTGGATCATGTTCTGCTTCAGTATCTTCTGAGATATTCTCATGTAAAGCGGAGGATGAGGACATGGATGATCCTTCTAGTACTCCAACACATGTGAAACGCAATTCTGCTGTTAGATTTCGTGATCCCGACTCGAATGAAATGGTGGATGATGATTACAATGATGACGAAGTTTTTTCTGGTTCTGAGTATGAAAGTGGAATCAGTACTCCTATTATGAACTACGTGAGGCCAATTCATGCTGCGAGACCTGGGAAAAGAGGCACGTGCTACCGTTGCCTTAGAGGGAACCGGTTCACTCAAAGAGAGGTTTGCATTGTTTGCAGTGCAAAGTATTGCAGAAAGTGTGTGCTGAGAGCAATGGGGTCAATGCCTGAAGGAAGAAAGTGTCTCACTTGCATTGGTCAGAGGATTGATGAGACAAAGAGGAGGAACCTTGGCAATTTTTCGAGGATGCTCAAGTCCTTGCTCTCTGATTGTGAAGTGAAGCAAATCATGAATGATGAGATGTTTTGTGAAGCAAATCAGATTCCAGCAGAGCAAATTGTTGTGAATGGGGAGCGTCTTGAGAGGGACAAGCTCATGCTGCTGCTGACATGTCGAAACCCTCCAAAAGAGTTGAAACCAGGCTTCTATTGGTATGATAAATCAGCAGGACTTTGGGGAAAGGAAGGTCAACGGCCGTGTCAGATTATAAGCCCTGATATTGATGTTGGGGGTAGCTTGCAGAAAAATGCAAGTCGTGGAAAAACAAGAGTAACTGTAAATGGTCGTGAGATTACTAAAGAAGAGTTATGGATACTAAAGCTTGCAGGAGTAAAATGGGATGGACCAACTGATTTCTGGGTGACTGCTGATGGATCATATGTTGAAGTGGGACATAGGAATGTCAAGGGCCGAATATGGGATAAGTTTGGAGCAAAGGTAGCTTTGGCATTTCTGTCCCTGTCACTTCCACCTAATCTGGTGACTACTCCCAGTGAAGGTGAAGGCAAAGGCGAAGGAGTGAACGGAGGTAGCCAAGACAACAACCATCAGCAGAAAATGCTTCACAAGTTTCTACTTGTTGGTTCTGCCAAGTCAGGAACAAGTACAATATTTAAACAGGCCAAGCATCTGTATAATGTTCCTTTCTCTGAAAATGAGCGCCAAATTATCAAGTTGGTGATTCAGAGCAACTTGTTTACCTACCTTGGCATGCTGTTAGAGGGGTGTGAATATTTTGAAGAGAGGAGTTTACTGGAGAAAACGAACACAGAACATGTCGACGAATCCACTTCATCTGAAGAGAACTCGGGGGAAATTATTGAAACAACTAGCTATTCTATTAGCCCAAGATTACAAGGTTTCTCAGATTGGCTAATCAAATACATGGTTTCTGGTAACTTGGATACAATATTTCGAGATATTATTCAAAATTATGGGCCAATGGTAGAGGAGCTGTGGAGTGATCCAGCAATTCAGGCCACATACAACAGGAGACATGAACTAAAATTGCTCCCCAGAAATGCAACTTATTTTCTAGACCGGGCTGTTGAGATTTCCAAGATAGACTATGAACCTTCTGACATGGACATCATGTACGCTGAGGGGATAACCTTGTCCAACAGCATTACTTCAATGGAATTCTCTTTCCCTGTGTTAAGTGGTGATGAGTCTTTGGATCATGAATATCAGCATGATCCTTCTTTGAGATACGAACTCATCCGAGCAGATCCTACAAGCCTTGGAGCAAAGTGCAGGTTGTTGGACATATTTGAAGACATTGATGTTGTCTTATTTTCTATTGCCTTAACTGATTATGATGAGTACATTGTAGAAAGTAATGGAGTTGTCAGCAACAAAATGTTACTAGCCAAGCAACTCTTTGAAAACATCATTACTCAGAGATCCTTCAACAACAAGAAATTCCTTTTACTTCTAACAAAATATGATCTGCTTGAGGAAAAGATTGAAGAGGCAAGTCTAACAAAATGTGAATGGTTCTGTGACTTCAATCCAGTTATCAGCCACAACCAAAAGAAAGGTAGAATTAATGATCATACCAATAGTCCTCCATTAGCTCAACGTGCTTTTCAATACATTGCTATGAAGTTCAAGACATTGTTCAAGTCTCTTACTGAAAGAAAGCTTTTTGTTTCACTTGTTACTGGTTTGGAACCTGATACTATTGATGAAGCTCTCAGATATGCAAGAGAGGTTATGGTGTGGGAAAAATGGGATCCTTCTGCCATAAATAAGTCTGAGATTACTTCAACAACCATTGATGAAGCAACCCTCACTTAA 2634 0.4142 MASLLKKLRPGVPSVVVDDGGGCDSNFEFSIAEEYKGPPLSYFIPEVPAFKLDQVPVAPIASSPPHHQSSLVVPVIQPIRKSSNATTKLKDGGNEDHKHGVVGLNLISKNSDTAEESGSCSASVSSEIFSCKAEDEDMDDPSSTPTHVKRNSAVRFRDPDSNEMVDDDYNDDEVFSGSEYESGISTPIMNYVRPIHAARPGKRGTCYRCLRGNRFTQREVCIVCSAKYCRKCVLRAMGSMPEGRKCLTCIGQRIDETKRRNLGNFSRMLKSLLSDCEVKQIMNDEMFCEANQIPAEQIVVNGERLERDKLMLLLTCRNPPKELKPGFYWYDKSAGLWGKEGQRPCQIISPDIDVGGSLQKNASRGKTRVTVNGREITKEELWILKLAGVKWDGPTDFWVTADGSYVEVGHRNVKGRIWDKFGAKVALAFLSLSLPPNLVTTPSEGEGKGEGVNGGSQDNNHQQKMLHKFLLVGSAKSGTSTIFKQAKHLYNVPFSENERQIIKLVIQSNLFTYLGMLLEGCEYFEERSLLEKTNTEHVDESTSSEENSGEIIETTSYSISPRLQGFSDWLIKYMVSGNLDTIFRDIIQNYGPMVEELWSDPAIQATYNRRHELKLLPRNATYFLDRAVEISKIDYEPSDMDIMYAEGITLSNSITSMEFSFPVLSGDESLDHEYQHDPSLRYELIRADPTSLGAKCRLLDIFEDIDVVLFSIALTDYDEYIVESNGVVSNKMLLAKQLFENIITQRSFNNKKFLLLLTKYDLLEEKIEEASLTKCEWFCDFNPVISHNQKKGRINDHTNSPPLAQRAFQYIAMKFKTLFKSLTERKLFVSLVTGLEPDTIDEALRYAREVMVWEKWDPSAINKSEITSTTIDEATLT* 878
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0654 877 Pfam G-protein alpha subunit 458 850 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Amo13g0654 877 SUPERFAMILY Transducin (alpha subunit), insertion domain 494 645 IPR011025 GO:0007165
Amo13g0654 877 Gene3D - 682 861 IPR027417 -
Amo13g0654 877 MobiDBLite consensus disorder prediction 133 171 - -
Amo13g0654 877 PRINTS Alpha G protein (transducin) signature 753 762 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Amo13g0654 877 PRINTS Alpha G protein (transducin) signature 635 657 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Amo13g0654 877 PRINTS Alpha G protein (transducin) signature 705 733 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Amo13g0654 877 PRINTS Alpha G protein (transducin) signature 468 483 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Amo13g0654 877 ProSiteProfiles G-alpha domain profile. 465 867 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Amo13g0654 877 PANTHER GTP-BINDING PROTEIN ALPHA SUBUNIT 19 874 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Amo13g0654 877 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 464 855 IPR027417 -
Amo13g0654 877 SMART galpha_1 456 835 IPR001019 GO:0003924|GO:0007186|GO:0019001|GO:0031683
Amo13g0654 877 MobiDBLite consensus disorder prediction 440 459 - -
Amo13g0654 877 Gene3D - 495 646 IPR011025 GO:0007165
Amo13g0654 877 PANTHER EXTRA-LARGE GUANINE NUCLEOTIDE-BINDING PROTEIN 2 19 874 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0654 Amo-Chr13 8075258 8079903 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0654 - - ahf:112788912 1681.77
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0654 13 8075258 8079903 Amo13g0654 13 8075258 8079903 ECH