Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0647 ATGATACAGATATCAATGATGGCTGCAGCATCAGCAATAATGTCTACTTCTACAATGATGGGAAATGCTACTGTTTGCACCACAAGGAGGAGGAAGAGAAGTGTTCACTACGTTGCAGGGTTGAATTCTTTTGGAGGATTGAAGGTGCAGAACAATGTCACCTCATTAGGCCATTCATTGTGCACTGAACAATCCTTTGCAAAGGTTGTGAGCTCATTGAAGGGAAAATCCAAAGGTGGTGGTGGTGGAGGAGGAGGAGCTGCATCTTCAACATGCAATGCTGCAGGTGAGATTTTCCAGATTGCAGCCATCATGAATGGACTTGTTCTTGTTGGTGTTGCTGTTGGATTCGTTCTTCTTCGAATCGAAGCATCTCTGGAAGTGGCTGCTGAGTGA 396 0.4495 MIQISMMAAASAIMSTSTMMGNATVCTTRRRKRSVHYVAGLNSFGGLKVQNNVTSLGHSLCTEQSFAKVVSSLKGKSKGGGGGGGGAASSTCNAAGEIFQIAAIMNGLVLVGVAVGFVLLRIEASLEVAAE* 132
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0647 131 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 5 129 - -
Amo13g0647 131 Pfam PetM family of cytochrome b6f complex subunit 7 96 123 IPR012595 GO:0009512
Amo13g0647 131 PANTHER B6F COMPLEX SUBUNIT, PUTATIVE, EXPRESSED-RELATED 5 129 - -
Amo13g0647 131 Hamap Cytochrome b6-f complex subunit 7 [petM]. 94 125 IPR012595 GO:0009512
Amo13g0647 131 SUPERFAMILY PetM subunit of the cytochrome b6f complex 95 127 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0647 Amo-Chr13 8029894 8031212 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0647 - - gmx:100500243 132.494
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0647 13 8029894 8031212 Amo13g0647 13 8029894 8031212 ECH