Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0635 ATGGCCGTCAACGATGCTGACCAATCAAACAGGCCTCACAGGTCGCGCCATTCCGGTGCCAAGAAGGCCAAATCCGACAAGAAGAAGAAGCAGCAGCAGCGCCAAAACGACGATGGAGGAGACGAGAAGAGGCAAAACCCTAAGGCGTTCGCGTTCTCTTCCACCAACAAGGCCAAGCGCTTGCAATCACGCTCCGTCGAGAAGGAGCAGCGCCGCCTCCATGTTCCCATCGTTGACCGCTCCTATGGCGAGCCCCCACCTTATGTCGTCGTTGTGCAAGGTCCACCGCAGGTTGGGAAGTCCCTGTTGATAAAGTCTTTGGTCAAGCATTACACAAAGCATAATTTGCCTGATGTGCGAGGCCCAATTACTATTGTTTCAGGAAAGCAAAGGAGGGTTCAGTTTGTTGAATGCCCAAATGATATTAATGGTATGATAGATGCGGCAAAGTTTGCTGATCTAGCACTGCTGCTTATAGATGGATCCTATGGTTTTGAAATGGAAACATTTGAATTCCTTAATATATTGCAAACACATGGGTTTCCAAAGGTCATGGGTGTTCTTACTCATCTTGACAAATTCAAGGATGCTAAAAAGTTGAGGAAAAGAAAACAAGAATTAAAACGCAGATTTTGGACTGAAATATATGACGGAGCTAAATTGTTTTATTTATCGGGCCTTATTCATGGAAAGTATGTCAAGCGCGAAGTTCACAATCTCGCGCGGTTTATTTCCGTAATGAAGTTTCATCCTCTATCTTGGCGAACTTCTCATCCGTATGTTTTGGTGGATCGTTTTGAAGATATCACGCCTCCTGAAAAAGTGCATGCAAATAACAAGTGTGACAGAAAAATCACACTTTATGGTTATCTTAGAGGGTGTAATTTAAAAAAGGGAAATAAGGTACATATTGCTGGGGTGGGTGATTATAGTTTAACCGCTGTTACTGCTTTACCTGATCCTTGTCCTCTTCCATCTGCTGCTAAAAAGAAAGGACTGCGTGATAAGGAAAAGTTGTTCTATGCTCCTATGTCTGGCCTCGGGGATCTTTTGTATGACAAAGATGCTGTATACATAAATATTAATGATCACCTTGTGCAGTTTTCAAAAGTTGATGATGAAAACTCAGCCATGACAAGCAAAGGTAAGGACAGAGATGTGGGGGAGGTTTTGGTGAAATCTCTTCAAAATACCAAATACTCGATCAATGAAAAGCTAGAAAATAGCTTTATCAATATTTTTGGTCAAAAGCCGGAAATGTCATCAGAAGCTGTAGCTGATGCATTGGCTACACACAAAGATAACAAGCATGATAGCGAAGAAGATGTTTCAGATAGAGATCAGCATGGGAAAGCTATTGAAACTGGTGAAGATGGTGATGGTTCAGAATCATCTGATCAGGATGAAGCTGGTGCCATGATGGGTGAAGCCAGTTCTTCTGATGACAGAGATGATGATGCAACTGATATGAAAGCCATTCCTGGAGACTTGAAAGAACATGTTGAATTTAAAGACGGGAGACGAAGGAGGAAAGCAATATTTGGAAATGATGTTGATCAAAGTGATATGATGGATTCAAAAGAGGATAATGATGCTGCTAGTGATGATGCGGCTTCTTCTGATTCAGAATCTTTTAAAGAGGACGACGACGATGATGATGATGATGAGGACAATGATGACGACAATGAGGATGACACAGATGATGATGACATGGGGAATGTTTCAAAGTGGAAAGAATCTTTAGCGGAAAGGACACTCTCACGGAAAACTCCTAGTTTGATGCAACTTGTGTATGGTGAATCTACTGTTAATATGACCTCTATAAACAAACAGAATGATAGTAGTGACGATGAGGAAAGTGACGATGACTTTTTTAAGCCTATTGAAGAAGTAAAAAAGCAAAGCATGAAAAATGGACTGAATGATGGAATGGTCAACACTGAGGATTGTTCCAAGTGTGAACCTTCTGTGGATCAGAGATGGGATAAGAAAGATAACGAGGGAATCCGCAATCGTTTTGTCACTGGAAATTTGGCAAAAGCTGCTCTCAGAAATTCTCTGTCAAATGGTAACACTGAAGAGGAAAATGATGAAGTCTACGGAGATTTTGAAGATCTAGAAACAGGAGAGAAATATGACAATTACCAGACAGATGATGCAGTTGCCACAACAGTACACAAAGGAGACGATGCGGAGGCTGAGCAGAGGAGGCTCAAGAAACTTGCCCTACGTGCAAAATTTGATTCACAGTATGATGGCGATGAAGTTGAGACACCAGAGGAAGATGCGGGCAATGATGAGAAGTCCAAACCTCATGGTCAAGCCAATGAAAGTAGTTATTTTGATAAGTTGAAAGAGGAAATTGAGCTTCGGAAACAAATGAATATAGCTGAACTCAATGATCTTGATGAAGATACCAGGTTAGAGATAGAAGGCTTCCGAAATGGGACATACCTAAGATTAGAGGTTCATGATGTTCCTTGTGAGATGGTTGAGTACTTTGATCCCTACCATCCCATATTGGTGGGAGGGATCGGTCTAGGGGAGGAAAATGTTGGATACATGCAGGCTAAGCTAAAGAGGCACAGGTTCCATAAGAAAGTGCTGAAGACCAGAGATCCAATTATAGTTTCCGTTGGATGGAGGCGTTACCAAACAACACCAGTATATGCTACTGAGGATCTCAATGGAAGACTGCGAATGCTAAAATATACTCCAGAACATGCACATTGCTTTGCCTTTTTTTGGGGCCCTCTTGCCCCTCCCAACACTGGGATAGTGGCTGTTCAGAATTTATCAAACAATCAGGCAACGTTTAGGATTACTGCAACTGCCGTTGTACTCGAGTATAATCATGCAGCTAGGATAGTGAAGAAAATCAAATTGGTTGGTTACCCATGCAAGATATTCAAGAAAACAGCATTTATCAAGGATATGTTTACTTCAGATCTTGAAGTAGCTCGGTTCGAAGGTGCAGCCATTCGAACTGTCAGTGGGATCAGGGGGCAGGTCAAGAAGGCTGCAAAAGAAGAGATAGGTAACCAACCAAAAAGGAAGGGTGGGCAAACCAAAGAAGGAATTGCTCGGTGCACATTTGAAGACAAGATTCTGATGAGTGACATTGTTTTCCTGCGTGCATGGACTCAAGTTGAAGTCCCAGATTTTTATAATCCATTGACAACAGCATTGCAGCCTCGTGACAAGACCTGGTTAGGAATGCGCACTGTTGCAGAATTGAGAAGAGAACACAACCTTCCTATACCTTTAAATAAAGATTCACTTTACAAGAAAGTTGAAAGAAAAAGAAAGAAGTATAATCCACTGGTGATTCCGAAGTCTCTACAGGAAAAGCTTCCCTTTGAATCAAAACCCAAGAATACGCCTAAGCGGAAGAGGAAGTCACTTGATCAGAAAAGGGCTGTCGTCATGGAAAGCGCTGAACGTAAAATTTGTCGTCTTTATCAGCATTATCGACTTATCGCAAATAATTCGGAAAAGAAGCGAAAGATTAATGCAGAAAAGAAGAGGAAAGAGCTCGAGAAGGAGAGAGCGAAGGATGAACTTCTGACGAGAAAGCGCCAGAGAGAGGAAAGACGAGTGAGATACCGTGCGCAAGACAAGCAGAACAAGAGAATGCGGAGAGCCGAAGCCTGA 3654 0.4226 MAVNDADQSNRPHRSRHSGAKKAKSDKKKKQQQRQNDDGGDEKRQNPKAFAFSSTNKAKRLQSRSVEKEQRRLHVPIVDRSYGEPPPYVVVVQGPPQVGKSLLIKSLVKHYTKHNLPDVRGPITIVSGKQRRVQFVECPNDINGMIDAAKFADLALLLIDGSYGFEMETFEFLNILQTHGFPKVMGVLTHLDKFKDAKKLRKRKQELKRRFWTEIYDGAKLFYLSGLIHGKYVKREVHNLARFISVMKFHPLSWRTSHPYVLVDRFEDITPPEKVHANNKCDRKITLYGYLRGCNLKKGNKVHIAGVGDYSLTAVTALPDPCPLPSAAKKKGLRDKEKLFYAPMSGLGDLLYDKDAVYININDHLVQFSKVDDENSAMTSKGKDRDVGEVLVKSLQNTKYSINEKLENSFINIFGQKPEMSSEAVADALATHKDNKHDSEEDVSDRDQHGKAIETGEDGDGSESSDQDEAGAMMGEASSSDDRDDDATDMKAIPGDLKEHVEFKDGRRRRKAIFGNDVDQSDMMDSKEDNDAASDDAASSDSESFKEDDDDDDDDEDNDDDNEDDTDDDDMGNVSKWKESLAERTLSRKTPSLMQLVYGESTVNMTSINKQNDSSDDEESDDDFFKPIEEVKKQSMKNGLNDGMVNTEDCSKCEPSVDQRWDKKDNEGIRNRFVTGNLAKAALRNSLSNGNTEEENDEVYGDFEDLETGEKYDNYQTDDAVATTVHKGDDAEAEQRRLKKLALRAKFDSQYDGDEVETPEEDAGNDEKSKPHGQANESSYFDKLKEEIELRKQMNIAELNDLDEDTRLEIEGFRNGTYLRLEVHDVPCEMVEYFDPYHPILVGGIGLGEENVGYMQAKLKRHRFHKKVLKTRDPIIVSVGWRRYQTTPVYATEDLNGRLRMLKYTPEHAHCFAFFWGPLAPPNTGIVAVQNLSNNQATFRITATAVVLEYNHAARIVKKIKLVGYPCKIFKKTAFIKDMFTSDLEVARFEGAAIRTVSGIRGQVKKAAKEEIGNQPKRKGGQTKEGIARCTFEDKILMSDIVFLRAWTQVEVPDFYNPLTTALQPRDKTWLGMRTVAELRREHNLPIPLNKDSLYKKVERKRKKYNPLVIPKSLQEKLPFESKPKNTPKRKRKSLDQKRAVVMESAERKICRLYQHYRLIANNSEKKRKINAEKKRKELEKERAKDELLTRKRQREERRVRYRAQDKQNKRMRRAEA* 1218
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0635 1217 MobiDBLite consensus disorder prediction 1116 1139 - -
Amo13g0635 1217 PANTHER RIBOSOME BIOGENESIS PROTEIN 10 423 IPR039761 GO:0042254
Amo13g0635 1217 PANTHER RIBOSOME BIOGENESIS PROTEIN 477 1208 IPR039761 GO:0042254
Amo13g0635 1217 MobiDBLite consensus disorder prediction 430 624 - -
Amo13g0635 1217 CDD BMS1 49 278 IPR037875 GO:0005525
Amo13g0635 1217 SMART DUF663_2 720 1050 IPR007034 -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 750 780 - -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 478 534 - -
Amo13g0635 1217 Coils Coil 1160 1199 - -
Amo13g0635 1217 Gene3D - 88 250 IPR027417 -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 15 29 - -
Amo13g0635 1217 ProSiteProfiles Bms1-type guanine nucleotide-binding (G) domain profile. 85 250 IPR030387 -
Amo13g0635 1217 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 84 224 IPR027417 -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 683 702 - -
Amo13g0635 1217 Pfam 40S ribosome biogenesis protein Tsr1 and BMS1 C-terminal 729 1051 IPR007034 -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 571 585 - -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 542 570 - -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 30 45 - -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 430 458 - -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 1171 1217 - -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 586 611 - -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 1 69 - -
Amo13g0635 1217 PANTHER BNAC08G44910D PROTEIN 10 423 - -
Amo13g0635 1217 PANTHER BNAC08G44910D PROTEIN 477 1208 - -
Amo13g0635 1217 MobiDBLite consensus disorder prediction 636 661 - -
Amo13g0635 1217 SMART aarp2cn2 236 322 IPR012948 GO:0005634|GO:0042254
Amo13g0635 1217 Pfam AARP2CN (NUC121) domain 236 321 IPR012948 GO:0005634|GO:0042254
Amo13g0635 1217 MobiDBLite consensus disorder prediction 763 780 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0635 Amo-Chr13 7907130 7915343 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0635 K14569 - gmx:100810906 1818.9