Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0622 ATGGCGGCGGCGGTGGACGACAGGTTCGCCGATTTGCAGAACCCTAAGACGTGCGTCGTTTTGGGCGGCAGAGGCTTCCTCGGTAGATCGCTGGTACTTAAGCTTCTCAATTTCGGTAACTGGATCGTCCGAGTCGCCGATTCCGCCGAGTCAATTCAGCTCCACGCTTCCGAGTCTCTTCTCTCTGATGCTCTCTCTTCTGCTCGCGCCTCTTACTTTCACCTCGAACTTAGGGATAAACTCAACGTAGCCAAAGTTCTCGAAGGTGCTTCGGTTGTCTTTTATATGGATGTTGCTGGCTTGAATCCGAATGACTTCTATAGTTGCTATACTCTTATAGTGCAAGGTGCCAAGAATGTCATTAGTGCTTGCAGAGAATGTAAAGTGAAACGCCTGATTTATAACAGCTCCGCGGATGTAGTATTTGATGGTTTCCATGATATACATAATGGAGATGAATCATTGCCATATCCATGGAAAATTGAAAACGTGTTAAGTGACTTTAAGGCTCAAGCAGAGGCATTGATCCTCAGTGCCAATGACATTGATGGCTTGTTGACATGTGCTCTTCGTCCTTGTAATGTTTTTGGACCTGGTGACACGGAGTTTGTGCCATTTTTTCTTGACTTGGCAAGATTTGGATTTGCAAAGTATATTATAGGGACTGGCGATAATATGTCAGACTTTACCTTTTATGAGAATGTTGCTCATGCCCATATATGTGCAGAAGAAGCCTTAAACTTTCAAACAGTCTCTGTGGCTGGAAAGGCATTTTTTATTACTAATTTTGAGCCTATGAAGTTCTGGGAATTTCTCTCACTTTTGTTGGAAGGTCTTGGATATCAAAGGCCACTCACCAAACTTCCTGTCAATTTGGTGCAATTCGTTCTCTCAGTTTTAAAGTGGATGCATGACAAGTTGGGGTCCGGAGGCTTCAGTTATCCTTTGTTAGTTCATTTTTTTCAGTTAGCAACACACACCAGAACTTTCAGCTGCACCGCAGCTCGGAGAGAACTTGCATACTTACCAATAATCTCCCTTGAGGAAGGGATCGCATTAACCATAGATTCGTTCTCTCATCTAGCCAGAGAGCTATCTATTTCAGGATGCTGTGATTCCACTGAACAGTCAAAAGCAGCTAAACTGCTTGGAGGTGGAAAAGTGGCTGATGTTTTGTTGTGGAGAAATGAAAAGACATCCTTTGCATGTTTCATTGTGATGGTTTTGTTATTTTACTGGTTTTTCCTCTCTGGAAGCCCTTTTATATCATCTGCTGCCAAATTCTTGATGCTTGTCACATTTCTTCTCTTTGGATGGGGTACTCTACCAGCAAACCTATTTGGGTTTCAAACAAAAAGGATATCCTCCTCTAGTTTTAAGATATCTAATTCAGAAATGAAAGGTTCAGTTACAACTACAGTGAATCAGTGGAACAACAATTATAAAACTATAAGGAGACTGCGTCAAGGGGAAGACTGGTTGACGTTCTTCAAGATTGCAATTCCACTTTACTTTCTGAAGTTGATCTTGTCAGCGCATAAGTTGACGACATTTGTAGGGATAGGTTTGGTATTTGCATTCACTGCATTTTTTATTTACGAGCAATACCAATCAGAAATTGATTTATTAGCGGAAATTCTTTTCGCTCAGTTGAATGCACTCATGAGATACTTGATGCGTGTTTTATCTGATTTGACTTCGCGTCTTCTGCAAAAATTTGGCAAGGCTCGGTCTTACAAGGAACCAGAAGTAAAGGAACTAAGATAG 1767 0.4171 MAAAVDDRFADLQNPKTCVVLGGRGFLGRSLVLKLLNFGNWIVRVADSAESIQLHASESLLSDALSSARASYFHLELRDKLNVAKVLEGASVVFYMDVAGLNPNDFYSCYTLIVQGAKNVISACRECKVKRLIYNSSADVVFDGFHDIHNGDESLPYPWKIENVLSDFKAQAEALILSANDIDGLLTCALRPCNVFGPGDTEFVPFFLDLARFGFAKYIIGTGDNMSDFTFYENVAHAHICAEEALNFQTVSVAGKAFFITNFEPMKFWEFLSLLLEGLGYQRPLTKLPVNLVQFVLSVLKWMHDKLGSGGFSYPLLVHFFQLATHTRTFSCTAARRELAYLPIISLEEGIALTIDSFSHLARELSISGCCDSTEQSKAAKLLGGGKVADVLLWRNEKTSFACFIVMVLLFYWFFLSGSPFISSAAKFLMLVTFLLFGWGTLPANLFGFQTKRISSSSFKISNSEMKGSVTTTVNQWNNNYKTIRRLRQGEDWLTFFKIAIPLYFLKLILSAHKLTTFVGIGLVFAFTAFFIYEQYQSEIDLLAEILFAQLNALMRYLMRVLSDLTSRLLQKFGKARSYKEPEVKELR* 589
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0622 588 Gene3D - 8 362 - -
Amo13g0622 588 Pfam 3-beta hydroxysteroid dehydrogenase/isomerase family 19 289 IPR002225 GO:0003854|GO:0006694|GO:0016616
Amo13g0622 588 ProSiteProfiles Reticulon domain profile. 388 577 IPR003388 -
Amo13g0622 588 PANTHER NAD DEPENDENT EPIMERASE/DEHYDRATASE 14 494 - -
Amo13g0622 588 PANTHER 3BETA-HYDROXYSTEROID-DEHYDROGENASE/DECARBOXYLASE ISOFORM 3 14 494 - -
Amo13g0622 588 Pfam Reticulon 388 545 IPR003388 -
Amo13g0622 588 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 11 360 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0622 Amo-Chr13 7718044 7725051 Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0622 17 364 Lipid Metabolism Gene Families AT2G33630 30.400 7.30e-34 133
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0622 K23558 - gmx:100814147 816.224