Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0613 ATGGCTTCCACCACCGCCGTCTCAGCCACCGGTTCCGGTCTCATCGTAAGCTTCAGCGAGATGTTCATCGACTTCGTCCCCACCGTTTCTGGCGTCTCCCTCGCCGGAGCCCCAGGCTTCCTCAAGGCACCCGGCGGCGCTCCTGCCAATGTCGCCATCGCCGTCTCTCGCCTCGGCGGCAAGTCCGCCTTCGTCGGCAAGCTCGGCGATGATGAGTTTGGCCACATGCTCGCCGGAATCCTCAAGGAAAACAACGTCGTCGCAGACGGCATCGCCTTCGATGAAGGCGCACGCACTGCACTCGCCTTCGTGACACTACGCTCCGACGGCGAGCGTGAGTTCATGTTCTATCGGAATCCCAGCGCCGATATGCTCCTCAAGCCCGAAGATCTCAATCTCGATCTCATCATATCTGCGAAAGTGTTTCACTACGGATCGATAAGCTTGATAGTGGAGCCATGCAGATCGGCACACGTGAAGGCGATGGAAGTGGCAAAGGAGGCAGGGTGCCTGCTCTCCTACGACCCTAACCTGCGGCTGCCGCTGTGGCCGTCCGCGGAGGAGGCACGGAAGCAGATACTGAGCATATGGGAGAAGGCTGACGTCATCAAGGTGAGTGACAATGAGCTGGAGTTCCTTACCGGCAGCGACAAGATCGACTATGCTTCTGCTCTCTCCCTCTGGCACCCCAACTTGAAGCTTCTCCTTGTCACCCTTGGTGAACATGGTTCCAGATACTACACCAAGAAATCCACAGCTGTCTTCCACGGTTTTATAAACACACTCAACGTAAACCACTATTGTCTCCAGCGATTTACAATGCCGCTGTCACTCCACCCCTTGCATACGCAACCGAATGCCGCTCTCGTCCGCACTCGTGTAGTCGCTGTACCCGCACCACTCTCGGACGCGGCCATAGCCGGACCCCTGTTTGGATCTTTCGCTGTCCCATGCGCACTCAGTAGCAGAACGTAG 975 0.5744 MASTTAVSATGSGLIVSFSEMFIDFVPTVSGVSLAGAPGFLKAPGGAPANVAIAVSRLGGKSAFVGKLGDDEFGHMLAGILKENNVVADGIAFDEGARTALAFVTLRSDGEREFMFYRNPSADMLLKPEDLNLDLIISAKVFHYGSISLIVEPCRSAHVKAMEVAKEAGCLLSYDPNLRLPLWPSAEEARKQILSIWEKADVIKVSDNELEFLTGSDKIDYASALSLWHPNLKLLLVTLGEHGSRYYTKKSTAVFHGFINTLNVNHYCLQRFTMPLSLHPLHTQPNAALVRTRVVAVPAPLSDAAIAGPLFGSFAVPCALSSRT* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0613 324 PANTHER HEXOKINASE FAMILY MEMBER 20 249 - -
Amo13g0613 324 SUPERFAMILY Ribokinase-like 15 254 IPR029056 -
Amo13g0613 324 Gene3D - 20 257 IPR029056 -
Amo13g0613 324 Gene3D - 21 116 IPR023314 -
Amo13g0613 324 CDD bac_FRK 14 258 - -
Amo13g0613 324 ProSitePatterns pfkB family of carbohydrate kinases signature 1. 45 69 IPR002173 GO:0016773
Amo13g0613 324 PANTHER BNAA04G18320D PROTEIN 20 249 - -
Amo13g0613 324 PRINTS Ribokinase signature 195 210 IPR002139 GO:0016301
Amo13g0613 324 PRINTS Ribokinase signature 235 246 IPR002139 GO:0016301
Amo13g0613 324 PRINTS Ribokinase signature 40 59 IPR002139 GO:0016301
Amo13g0613 324 Pfam pfkB family carbohydrate kinase 14 257 IPR011611 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0613 Amo-Chr13 7649484 7659442 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0613 K00847 - ahf:112769128 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo18g0029 18 927992 931553 Amo13g0613 13 7649484 7659442 PCT
Amo13g0613 13 7649484 7659442 Amo18g0029 18 927992 931553 PCT