Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0573 ATGCAGAAGCCGGGGCAGGCTGTTGATTTCGCCCTGAAGGAGACATATCCGAAGATAGGAGCAGGGGCAGTAACAGGTGACAAGCTATCGTGCACCTATGATCTTGTTGAACAGATGCAATATTTGTATGTTAGAGTTGTGAAAGCCAAGGATTTGCCTTCAAAGGATGTAACTGGTGGTGTTGATCCCTATGTTGAAGTGAAGCTTGGAAACTACAAGGGAATTACCAAGCATTTTGAGAAGAAGTCCAATCCTGAATGGAACCAGTGCTTTGCATTCTCCAAGGACAGGATTCAAGCCTCAGTCTTGGAGGTTGTTGTCAAAGACAAGGATGTTGTTGTTGATGATTTTGTTGGGAGGGTTTGGTTTGATCTGAATGAGATCCCCAAACGCGTTCCGCCGGATAGTCCTCTGGCTCCACAGTGGTACAGATTGGAGACTAGAAAGGGCGAAAAGGCGAAAGGAGAGTTGATGCTAGCGGTTTGGATGGGGACTCAAGCGGATGAGGCTTTTCCTGATTCATGGCATTCTGATGCAGCAATGGTTGGAACTGAATCTGTTGCAAACATAAGATCAAAGGTTTATCTCTCACCAAAGCTTTGGTATGTTAGAGTGAATGTGATTGAGGCTCAGGACTTGGTACCTGGTGATAAAACCAGGTACCCTGAAGTTTATGTGAAGGCTAATCTAGGACATCAGATGCTAAGGACTAGGGTGTCTCAAATTAAGACAATCAATCCAATGTGGAATGAGGATTTGATGTTTGTTGCTGCTGAGCCATTTGAGGAGCCTTTGGTTTTGACAGTGGAAGACAGAGTTGGACCAAACAAAGATGAAACCTTAGGAAGGTGTTTGATTCCTCTGCACCAAGTGCAAAGGAGGCTAGATCACAAGCCTGTGAACACAAGATGGTTCAATCTTGAGAAGCATATTGGTGCTGAAGGGGAGAAAAAGGAGACGAAATTTGCTAGCCGGATTCATTTAAGGGTGTGTTTGGATGGAGGGTACCATGTGTTGGATGAATCAACTCATTATAGTAGTGATCTTAGACCAACTGCCAAACAGCTTTGGAAGCCTAGTATTGGAATTCTTGAAGTTGGGATCATAAGTGCACAAGGGCTAATGCCAATGAAGACAAGAGATGGTAGAGGAACTACTGATGCTTATTGTGTGGCGAAATATGGCCAGAAATGGATCCGAACTCGGACAATTGCAGATAGCTTTGCACCAAAGTGGAATGAGCAATACACTTGGGAGGTTTTTGATCTATCTACTGTTATCACTGTAGGTGTCTTTGATAATGGTCATTTACATGGCGGTGGCGACAAATCCGGTGGATCGAAAGATTCTAGGATAGGGAAGGTGAGGATTAGGCTATCAACTCTTGAATCTGATAGAGTTTATACTCACTCTTACCCTCTTCTAGTGCTGCATAATTCTGGTGTGAAGAAAACTGGTGAAGTTCAATTGGCTGTTAGGTTCACAAGCTCATCTTTCATAAACATGATGTATCTTTATTCCCAGCCTTTGTTGCCAAAGATGCATTACATCCACCCTCTATCTGTGATCCAGCTGGACAATCTGCGGCACCAGGCAACGCAGATTGTGTCGATGAGGCTGAGCCGGGCTGAGCCGGCTCTAAGGAAAGAGGTTGTGGAATACATGCTTGATGTGGATTCACATATGTGGAGCATGAGGAGAAGCAAGGCTAATTTCTTCAGAATAATGAAAGTTCTTGGTGGTTTAATAGCATTTGGGAGATGGTTTGATCAGATATGCAATTGGAAAAACCCCATCACAACAATACTAATCCATATCCTTTTCATAATCTTGGTTCTTTATCCTGAACTAATCCTCCCTACAATCTTCTTGTATCTTTTCTTGATTGGGATTTGGAACTTTCGATGGCGGCCACGACACCCTCCCCATATGGACACAAGGCTCTCACATGCTGATGCTGCTCACCCTGATGAACTTGATGAAGAGTTTGATTCATTTCCAACTTCAAGATCATCAGATATTGTTAAAATGAGGTATGATCGGTTAAGGAGCATTGGAGGGAGAGTGCAAACTGTGGTAGGAGACTTGGCCACACAAGGAGAAAGGTTTCAAAGTTTGTTAAGTTGGAGAGATCCAAGGGCTACAACCTTGTTTGTGACATTCTGTCTTGTTGCTGCTGTAGTTCTTTATGTTACTCCTTTTCAGGTTGTGTGCCTTCTCAGTGGATTCTATGTTCTGAGACATCCAAGGTTTCGCCATAAGCTTCCATCAGTTCCAATCAACTTCTTTAGGAGATTGCCAGCAAGATCAGATAGCATGTTGTAA 2325 0.4348 MQKPGQAVDFALKETYPKIGAGAVTGDKLSCTYDLVEQMQYLYVRVVKAKDLPSKDVTGGVDPYVEVKLGNYKGITKHFEKKSNPEWNQCFAFSKDRIQASVLEVVVKDKDVVVDDFVGRVWFDLNEIPKRVPPDSPLAPQWYRLETRKGEKAKGELMLAVWMGTQADEAFPDSWHSDAAMVGTESVANIRSKVYLSPKLWYVRVNVIEAQDLVPGDKTRYPEVYVKANLGHQMLRTRVSQIKTINPMWNEDLMFVAAEPFEEPLVLTVEDRVGPNKDETLGRCLIPLHQVQRRLDHKPVNTRWFNLEKHIGAEGEKKETKFASRIHLRVCLDGGYHVLDESTHYSSDLRPTAKQLWKPSIGILEVGIISAQGLMPMKTRDGRGTTDAYCVAKYGQKWIRTRTIADSFAPKWNEQYTWEVFDLSTVITVGVFDNGHLHGGGDKSGGSKDSRIGKVRIRLSTLESDRVYTHSYPLLVLHNSGVKKTGEVQLAVRFTSSSFINMMYLYSQPLLPKMHYIHPLSVIQLDNLRHQATQIVSMRLSRAEPALRKEVVEYMLDVDSHMWSMRRSKANFFRIMKVLGGLIAFGRWFDQICNWKNPITTILIHILFIILVLYPELILPTIFLYLFLIGIWNFRWRPRHPPHMDTRLSHADAAHPDELDEEFDSFPTSRSSDIVKMRYDRLRSIGGRVQTVVGDLATQGERFQSLLSWRDPRATTLFVTFCLVAAVVLYVTPFQVVCLLSGFYVLRHPRFRHKLPSVPINFFRRLPARSDSML* 775
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0573 774 Pfam C2 domain 362 474 IPR000008 -
Amo13g0573 774 Pfam C2 domain 41 134 IPR000008 -
Amo13g0573 774 Pfam C2 domain 201 307 IPR000008 -
Amo13g0573 774 Gene3D C2 domain 185 332 IPR035892 -
Amo13g0573 774 CDD C2B_MCTP_PRT_plant 41 165 - -
Amo13g0573 774 PANTHER C2 CALCIUM/LIPID-BINDING PLANT PHOSPHORIBOSYLTRANSFERASE FAMILY PROTEIN 5 774 - -
Amo13g0573 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 41 178 IPR035892 -
Amo13g0573 774 Gene3D C2 domain 32 164 IPR035892 -
Amo13g0573 774 Gene3D C2 domain 360 498 IPR035892 -
Amo13g0573 774 PANTHER ANTHRANILATE PHOSPHORIBOSYLTRANSFERASE-LIKE PROTEIN 5 774 - -
Amo13g0573 774 Pfam Plant phosphoribosyltransferase C-terminal 619 774 IPR013583 -
Amo13g0573 774 CDD C2D_MCTP_PRT_plant 363 491 - -
Amo13g0573 774 CDD C2C_MCTP_PRT_plant 202 351 - -
Amo13g0573 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 201 353 IPR035892 -
Amo13g0573 774 ProSiteProfiles C2 domain profile. 23 143 IPR000008 -
Amo13g0573 774 SUPERFAMILY C2 domain (Calcium/lipid-binding domain, CaLB) 362 504 IPR035892 -
Amo13g0573 774 ProSiteProfiles C2 domain profile. 345 472 IPR000008 -
Amo13g0573 774 SMART C2_3c 41 137 IPR000008 -
Amo13g0573 774 SMART C2_3c 363 471 IPR000008 -
Amo13g0573 774 SMART C2_3c 202 300 IPR000008 -
Amo13g0573 774 ProSiteProfiles C2 domain profile. 181 305 IPR000008 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0573 Amo-Chr13 7248384 7251787 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0573 1 774 Lipid Metabolism Gene Families AT3G57880 82.839 0.0 1359
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0573 - - gmx:100788273 1397.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0573 13 7248384 7251787 Amo13g0573 13 7248384 7251787 ECH