Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0569 ATGGATAAATACTTGGTCCCGTTGAAACCCTCAGCGGAAAAGGTTCATCCTCTTCATAGGTGCCGTTGGAAAAGGAGCAATGTTGAACTGAATGGAAGATTTGAACCTAACTATTGCCATGAGATGCTGGATTTGCTAAGTCGTTCCTACTCTGAGGTGGGTGTTTTTCCGCATCTGTATCATGCAGATGAGACGCCTTGCGAATCGCATATCCAACGAGCTATTACCAGAGCAAATGGTGATGGAAATCTTCCATCCAAGCAAGGCATCTCTGCAGTGGACTTTGACAACAAGGGAATATACTTGGCATCTGTGACAAAGTTGGGATGCTTAACAGTTCATGACTTTGAAGCTCTTTACTGTCAGACACATAAACAAACTTGCTTGAAAGAAGACGAAAGCAAGCATTTACTGCATCTCTCACTAAAACGACAACTTGATACTGTTAGATGGAATCCTATTAACCAGGATGAGGTGTTGAGGACACGAAATACAGCAACAGTTCATGGGTACAACGGACACAAAGGTCTCTCTGATGTTGCCTTTACGTCAAATGACTCATGGATACTTGCTTCTGATACACATGGTGGGATCAATGTTTGGGATAGAAGAGTGAAAGCTCTACCTTCTCTTGAGCTTACGTCTGGTTCATCTAGTACCCTAAACAGCATCCAAATAAATGTTGAAAATCAGATTATTTTTGGTGCTGGGAAGAGTGGCTTTGTGTATGTGTGGGACATTCGTGGCGGAAGAGCATCTACTACTTTTCAGAGTCACAAAGAGATGTGTCATCCTCCTATAACATCGTTGAAGTTGGCAACATTACTAGAGAAGATTGGATCTTTGAAGGCACAAGCTAATATTGTTTGCAAAGAGATTCATTCTATTCGATTCAATCCATGTTGCCCATATCAGCTAGCATTCCATCTTGATGATGGCTGGTCGGGTGTTTTAGATATTAATACTTTACAAGTTACACACATTCATTGCCCTCCCCCAGCTTGGTTAAATGATTCCTATCTTCCTATAGATCTATCATATATAAGAAAACCTTCATGGTTATCTACATGTTCGATCTATTTGGTTGGTTCATCATCTGATAGTGGCATTCATCTCTTAGATTTCTACCCTAGTACCAGCTCGCCGAGCCATGTGCATTACAAAGAGGATACTGATAATGTTTCCAAGATGAATAGGAGTAAAAATCATCAAAACAGATTTATTCCTTTATCTGAAGGAATTATTTCATGTGCTGCACATCCTTTATATAATGCCATCGTAGTAGGAACAAAGAAGACATCTTTGCTCGTGATTTCACAAAGACGAAGGTCAAACAGTGAAGAAGATTAG 1350 0.403 MDKYLVPLKPSAEKVHPLHRCRWKRSNVELNGRFEPNYCHEMLDLLSRSYSEVGVFPHLYHADETPCESHIQRAITRANGDGNLPSKQGISAVDFDNKGIYLASVTKLGCLTVHDFEALYCQTHKQTCLKEDESKHLLHLSLKRQLDTVRWNPINQDEVLRTRNTATVHGYNGHKGLSDVAFTSNDSWILASDTHGGINVWDRRVKALPSLELTSGSSSTLNSIQINVENQIIFGAGKSGFVYVWDIRGGRASTTFQSHKEMCHPPITSLKLATLLEKIGSLKAQANIVCKEIHSIRFNPCCPYQLAFHLDDGWSGVLDINTLQVTHIHCPPPAWLNDSYLPIDLSYIRKPSWLSTCSIYLVGSSSDSGIHLLDFYPSTSSPSHVHYKEDTDNVSKMNRSKNHQNRFIPLSEGIISCAAHPLYNAIVVGTKKTSLLVISQRRRSNSEED* 450
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0569 449 SUPERFAMILY WD40 repeat-like 87 439 IPR036322 GO:0005515
Amo13g0569 449 SMART WD40_4 164 202 IPR001680 GO:0005515
Amo13g0569 449 SMART WD40_4 206 246 IPR001680 GO:0005515
Amo13g0569 449 SMART WD40_4 77 115 IPR001680 GO:0005515
Amo13g0569 449 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 158 448 - -
Amo13g0569 449 Gene3D - 67 446 IPR015943 GO:0005515
Amo13g0569 449 ProSiteProfiles Trp-Asp (WD) repeats profile. 214 255 IPR001680 GO:0005515
Amo13g0569 449 PANTHER WD40 REPEAT PROTEIN 12, 37 158 448 - -
Amo13g0569 449 PANTHER TRANSDUCIN/WD40 REPEAT-LIKE SUPERFAMILY PROTEIN 1 160 - -
Amo13g0569 449 PANTHER WD40 REPEAT PROTEIN 12, 37 1 160 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0569 - - gmx:100780441 670.233
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0569 13 7209914 7215873 Amo13g0569 13 7209914 7215873 ECH