Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0561 ATGTCAATGAACATGGATTGTTTAGGGTTAAGGAAGAGGATGAAGGAGGAGGCTTCTGTTGTTCTCTTATTGCTTACTTTGTCACTTGTTGTGTGTTGTTGCTATGCACAGACAAAAGAATGCACAAACATTCCAACACAATCACACTCCTTCCGCTATGAACTCTTAACTTCCAAGAATGAAACTTGGAAGAAAGAAGTGATGTCTCATTTCCATTTGACACCAACAGATGATTCAGCATGGGCTGATTTGCTTCCAAGGAGGTTCCTATCACAGAGGGACCAACATGATTGGGCATTCATGTACAGGAAAATCAAGAACCTTGGTGTGTTTAAGGACTCTCCTGAGGCTGCAGGGTTCCTCAAAGAGGTGCCTTTGCAGGATGTGAGGCTGCCGTTGGATTCAATCCATGGCAGGGCACAGAACACCAACTTGGAGTATCTCTTGATGTTGGATGTTGACAGGTTGCTTTGGAGTTTCAGGAAGACAGCTGGTCTTGATACTCCTGGGACACCTTATGGAGGATGGGAAGGTTCCAATGTTGAGCTCAGGGGTCATTTTGTTGGGCATTACTTAAGTGCATCAGCTCTAATGTGGGCGAGCACACAGAATGATAAATTGAAGGATAAAATGTCAGCCGTTGTCGTCGGTCTCTCTGCCTGTCAGCAGAAAATTGGAACTGGATATCTCTCTGCATTTCCATCTGAGTTTTTTGACAGATTTGAAGCTATTCAGCCTGTGTGGGCTCCCTATTACACCATTCACAAGATATTGGCCGGCCTATTGGATCAACATACTTTTGCTGGAAATCCTCAAGCTCTAAAAGTTGTGACATGGATGGTTGATTACTTTTACAACCGAGTGTTGAATGTAATAACAAAGAACACTATAAGTAGGCACTATGAATCACTGAATGAGGAAACTGGGGGAATGAATGATGTCCTTTACAGATTGTTCACGTTAACGGCAGATCCAAAGCATTTAATGTTGGCTCACCTTTTTGACAAGCCATGTTTTTTAGGGTTGCTTGCTGTACAGGCTAATGACATAACTAATTTTCATGCTAATACACATATCCCCGTTGTTATTGGAGCTCAAATGCGGCATGAAGTCACTGGTGATCCACTTTATAAGGATATTGGGACATTCTTTATGGACATTATTAACTCTTCTCACAGCTATGCTACTGGAGGAACATCAGTGTCGGAGTTCTGGCATAATCCAAAGAGAATAGCAGACAACTTAAAAACAACAGAAACTGAAGAATCATGCACAACTTACAACATGTTGAAGGTTTCTCGCCACCTGTTTAGATGGACCAAGGAGGTTTCTTATGCAGATTATTATGAACGCGCCTTGACGAATGGTGTACTTAGCATTCAAAGGGGAACAGATCCTGGAGTGATGATTTATATGCTTCCCCTAGCCAGAGGGGTTTCCAAGGCCAAAACTGGACATGGCTGGGGAACACAGTTTGATTCTTTCTGGTGCTGCTATGGAACAGGAATTGAGTCATTCTCAAAGCTTGGAGATTCTATCTATTTTGAAGAGCAGGCGAATGAACCTACTCTTTATATCATTCAGTATATATCAAGCTCCTTTAATTGGAAATCTGGGGAAATTGAGATCAATCAAACCGTAGATCCAGTTGTTTCATGGGATCCTTACCTAAGAGTCACATTTACATTTTCTCCTAACGAGAAAACCGGGAGTACGTTGAAATTTCGCATACCATCTTGGACTAGTTTGGATGGTGCCAAAGCAACATTGAACGATGCAACTTTATCTCTACCAAGTCCTGGAAATTTTTTGTCAGTAAGCCGACAGTGGAGTGCAGGTGACAAACTGAAGCTTCAGTTGCCTATTACCATCAGAACAGAGGCCATAAAAGATGACAGGCCTGAATATGCATCTGTTCAAGCAATTCTTTATGGACCATATCTCCTTGCCGGCCATACAACCGGTGATTGGGACATTAACTCCAGCGGTAAAACAACTTCTGGAGATTGGATTACCCCAGTTTCTGCCAGCTACAATAGTCAACTATTCACTTTGTACCAAGGCTTTGCAAACTCAACTTATGCCTTAACAAACACAAACCAATCATCACTTACAATGGAATCATTACCTACATCTACATCAGACCCTGATTCTGCCATTGACAAAACATTTAGGCTAGTCCCAAAAGATCCTTCCACAAAGTTCTCTACATGGAAGGATCTTATTGGCAAATCCGTGACGATAGAACTATTTAATCCCCCTGGCATGTATGTGATTCACCAAGGACCAAACCAACCTCTTATTATTGATCAATCCAAAAGTGCGGCATCTTCTTCCTTTATCGTGGTACAAGGCTTGGATGGACAAAAGGAAACGGTATCTTTGAAATCTGAAAGCGATGATGGTTGCTTTGTTACCACTGATGGAGGAGTGAAGCTTAGTTGCAGTGGCTCTGGAGATGATTTTAACCAAGCAGCAAGCTTTGTTATAGAAGAAGGAATAAGGAAATATAATCCTATTAGCTTTGTGGCTAAGGGTGCAAACAGGGATTTTCTCTTGGAGCCATTGTTCACATTCAAAGATTTGCCTTATACTGTTTATTTCAACATTCAAAGTTGA 2619 0.417 MSMNMDCLGLRKRMKEEASVVLLLLTLSLVVCCCYAQTKECTNIPTQSHSFRYELLTSKNETWKKEVMSHFHLTPTDDSAWADLLPRRFLSQRDQHDWAFMYRKIKNLGVFKDSPEAAGFLKEVPLQDVRLPLDSIHGRAQNTNLEYLLMLDVDRLLWSFRKTAGLDTPGTPYGGWEGSNVELRGHFVGHYLSASALMWASTQNDKLKDKMSAVVVGLSACQQKIGTGYLSAFPSEFFDRFEAIQPVWAPYYTIHKILAGLLDQHTFAGNPQALKVVTWMVDYFYNRVLNVITKNTISRHYESLNEETGGMNDVLYRLFTLTADPKHLMLAHLFDKPCFLGLLAVQANDITNFHANTHIPVVIGAQMRHEVTGDPLYKDIGTFFMDIINSSHSYATGGTSVSEFWHNPKRIADNLKTTETEESCTTYNMLKVSRHLFRWTKEVSYADYYERALTNGVLSIQRGTDPGVMIYMLPLARGVSKAKTGHGWGTQFDSFWCCYGTGIESFSKLGDSIYFEEQANEPTLYIIQYISSSFNWKSGEIEINQTVDPVVSWDPYLRVTFTFSPNEKTGSTLKFRIPSWTSLDGAKATLNDATLSLPSPGNFLSVSRQWSAGDKLKLQLPITIRTEAIKDDRPEYASVQAILYGPYLLAGHTTGDWDINSSGKTTSGDWITPVSASYNSQLFTLYQGFANSTYALTNTNQSSLTMESLPTSTSDPDSAIDKTFRLVPKDPSTKFSTWKDLIGKSVTIELFNPPGMYVIHQGPNQPLIIDQSKSAASSSFIVVQGLDGQKETVSLKSESDDGCFVTTDGGVKLSCSGSGDDFNQAASFVIEEGIRKYNPISFVAKGANRDFLLEPLFTFKDLPYTVYFNIQS* 873
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0561 872 PANTHER - 22 872 - -
Amo13g0561 872 SUPERFAMILY AbfB domain 752 843 IPR036195 GO:0046373|GO:0046556
Amo13g0561 872 PANTHER PROLINE-TRNA LIGASE (DUF1680) 22 872 - -
Amo13g0561 872 Pfam Beta-L-arabinofuranosidase, GH127 129 650 IPR012878 -
Amo13g0561 872 Gene3D - 741 858 - -
Amo13g0561 872 SUPERFAMILY Six-hairpin glycosidases 185 461 IPR008928 GO:0005975
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0561 Amo-Chr13 7127312 7133288 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0561 K09955 - gmx:100781521 1301.19
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0561 13 7127312 7133288 Amo13g0561 13 7127312 7133288 ECH