Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0545 ATGTCGATAGTGCCAATCAAGCAGGATGGTGAGGGCGAGGGGTCTAACTCTTTGGTTGATGCATTCTTGGGTTCCCGTATGGAGCTGTGGGACCCCTTCCACTTCATGCCCGCCCCGTTCTCCCACATGTTGTCGGGTTTGGGACTCGGGTCATCGATGAACACCCGGTTGGACTGGAGGGAGAATTCGAAGGCACACGTGTGGAAGGTGGTGCTACCTGGGTTCACGGATGAGGACGTTCTGGTTGAGCTCCAAGACGAGAGGGTGCTTCAGGTGAGCGTGGAGAGCGGCAAGTTCATGAGCAGATTCAAGGTACCTGATGACGCTAACCTTGAGCAACTCAAGGCCAATATGCACAACGGGGTTCTGCTTATCACTGTTCCCAAGTATCAACAAGCCTCCAACATTAGGGTCGTTGAGATTGAAGGCTCTGATTGA 438 0.5342 MSIVPIKQDGEGEGSNSLVDAFLGSRMELWDPFHFMPAPFSHMLSGLGLGSSMNTRLDWRENSKAHVWKVVLPGFTDEDVLVELQDERVLQVSVESGKFMSRFKVPDDANLEQLKANMHNGVLLITVPKYQQASNIRVVEIEGSD* 146
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0545 145 SUPERFAMILY HSP20-like chaperones 33 134 IPR008978 -
Amo13g0545 145 PANTHER HEAT-SHOCK PROTEIN 20 FAMILY MEMBER 1 144 - -
Amo13g0545 145 PANTHER 17.5 KDA CLASS I HEAT SHOCK PROTEIN 1 144 - -
Amo13g0545 145 ProSiteProfiles Small heat shock protein (sHSP) domain profile. 48 144 IPR002068 -
Amo13g0545 145 Pfam Hsp20/alpha crystallin family 58 141 IPR002068 -
Amo13g0545 145 Gene3D - 21 143 IPR008978 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0545 Amo-Chr13 6893823 6894954 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0545 K13993 - gmx:100797426 162.155