Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0544 ATGCACTTTATTGATTCTGTGGCTAGAGAACTCAACCTTCCTACCATACTCTTCAGAACCACATGTGCTACTAATTATCTCTCTTACCATTGGTTATCTATGCTACAAAGAAACGGATATCTTCCCTTACAAGATTCTAGCTGTGTGTGTATGGAGATGGTGGAAGGACTTGAACCTCTACGATTCAAAGATTTACCAATTTTTAATTTGGGAGAATCTGAAACAGATATCATGGTGAAACAAGCAACTGAATCACTCTCAGTAAAGCCATCATTAGGTGTCATCTTCAACACTATCGAATTCCTCGAATCTTCATCGCTCCAAAAACTTCGGAACCTCTACAAAGTTGGTGTGTTTCCCATAGGACCCTTACACATGTGCATGACGTCATCAGAAACACAAGAGAAGAATAATAATTGTTCAACAAGCCTCGTGAAAGAAGACTATAGCTGCATAACATGGCTGAACGAACAAGAGCCACGTTCAGTTCTGTATGTGAGTTTAGGAAGCATAGCAAGTTGGGAAGAAAAAGAACTAATCGAAGTGGCTTATGGTTTAGCAAACAGCGAACAAAAGTTTCTATGGGTGATAAGACCAGAAACAATAAAGTCGATTCCGGAAGAAGTGAAAAGTGCGGCAAGAGAGAAGGGTAAAATAATAAAATGGGCACCGCAGAGAGAAGTTCTGGCGCATAGAGCAGTGGGAGGGTTCTGGAGCCACTGTGGATGGAATTCGACGCTGGAGAGCATGTGCTTTGGGGTTCCGATGATGTGTCAGCCGTGCTTCGGAGACCAGAGGGTGAATGCAAGGTTGGTGAGTAATGTATGGAAGGTGGGAATAGAATGCTCGGAGATGAGAATAAAGAGGGATGAGGTGGAAGGTGCGGTGAGGAGAATGATGGTGAGTGAGGAAGGAAAGTTAATGAGAGAGAAAGCGGTGTTGATGAAGGATAAAATTAAGATAAGTGTTAGAGATAATGATGCTTTAAATGGAATTGTTCATGCTATCGTCATGTCTTCTTCTAATTCTTCTGCACCACATAATAATCATAACTCGTCATAG 1062 0.4171 MHFIDSVARELNLPTILFRTTCATNYLSYHWLSMLQRNGYLPLQDSSCVCMEMVEGLEPLRFKDLPIFNLGESETDIMVKQATESLSVKPSLGVIFNTIEFLESSSLQKLRNLYKVGVFPIGPLHMCMTSSETQEKNNNCSTSLVKEDYSCITWLNEQEPRSVLYVSLGSIASWEEKELIEVAYGLANSEQKFLWVIRPETIKSIPEEVKSAAREKGKIIKWAPQREVLAHRAVGGFWSHCGWNSTLESMCFGVPMMCQPCFGDQRVNARLVSNVWKVGIECSEMRIKRDEVEGAVRRMMVSEEGKLMREKAVLMKDKIKISVRDNDALNGIVHAIVMSSSNSSAPHNNHNSS* 354
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0544 353 Gene3D Glycogen Phosphorylase B; 1 325 - -
Amo13g0544 353 PANTHER UDP-GLYCOSYLTRANSFERASE 76E5 1 336 - -
Amo13g0544 353 CDD GT1_Gtf-like 1 320 IPR002213 GO:0008194
Amo13g0544 353 Pfam UDP-glucoronosyl and UDP-glucosyl transferase 148 303 IPR002213 GO:0008194
Amo13g0544 353 PANTHER GLUCOSYL/GLUCURONOSYL TRANSFERASES 1 336 - -
Amo13g0544 353 Gene3D Glycogen Phosphorylase B; 146 321 - -
Amo13g0544 353 SUPERFAMILY UDP-Glycosyltransferase/glycogen phosphorylase 6 321 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0544 Amo-Chr13 6890442 6892450 Dispersed/Transposed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0544 1 337 Glycosyltransferase AT3G46680 44.023 5.46e-96 291
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0544 - - gmx:100786860 384.8
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0544 13 6890442 6892450 Amo13g0544 13 6890442 6892450 ECH