Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0540 ATGTCGAGTGGTAGATCAATTGGGGTGGCCTTGGACTTCTCTCATGGAAGCAAACTTGCTCTGAAATGGGCTATTGAGAATCTCATCCGAAACGAAGACACCCTTTATGTGATCCACATCAAGCCCCCTCAATCTAGTGAATCTAGGAATCTTCTGTGGTCTACAACTGGTTCTCCTCTGATCCCTTTGGTGGAGTTTCGTGAGCAGGAGGTCATGAACAACTATGAGGTCCAAACTGATCCTGAGGTCTTGGACATGCTTGACACTGCTACTAGGCAGAAACAGGTGACGGTGGTAGCAAAGATATACTGGGGTGATCCAAGAGATAAAGTTTGTGAAGCTGTTGAGGACTTGAAGCTTGACTCTTTGGTAATGGGTAGCAGAGGCTTGGGTGCCATTCAGAGGGTATTGCTGGGGAGTGTTACAAATTATGTAACTACAAATGCAACTTGTCCTGTAACAATTGTCAAAGACTCTGCCCCTTCTACCGCTTGA 495 0.4606 MSSGRSIGVALDFSHGSKLALKWAIENLIRNEDTLYVIHIKPPQSSESRNLLWSTTGSPLIPLVEFREQEVMNNYEVQTDPEVLDMLDTATRQKQVTVVAKIYWGDPRDKVCEAVEDLKLDSLVMGSRGLGAIQRVLLGSVTNYVTTNATCPVTIVKDSAPSTA* 165
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0540 164 Gene3D HUPs 2 164 IPR014729 -
Amo13g0540 164 SUPERFAMILY Adenine nucleotide alpha hydrolases-like 5 158 - -
Amo13g0540 164 CDD USP_Like 7 156 - -
Amo13g0540 164 Pfam Universal stress protein family 5 157 IPR006016 -
Amo13g0540 164 PANTHER ADENINE NUCLEOTIDE ALPHA HYDROLASE SUPERFAMILY PROTEIN 1 162 - -
Amo13g0540 164 PRINTS Universal stress protein signature 4 22 IPR006015 -
Amo13g0540 164 PRINTS Universal stress protein signature 117 129 IPR006015 -
Amo13g0540 164 PRINTS Universal stress protein signature 135 157 IPR006015 -
Amo13g0540 164 PANTHER IMP2'P 1 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0540 Amo-Chr13 6848216 6849439 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0540 - - gmx:100306505 268.855
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0540 13 6848216 6849439 Amo13g0540 13 6848216 6849439 ECH