Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0490 ATGGAGAAAGAAGACATGGTGGCACTTGCTCTCCATACTCCATCACTCTCACTATCACTCTCCAAACTCAGAAGAACAACATCACATTCACATTCAAATTCGATCACCATGTTGCACGCGCCGCCGACACATCCCAAGTGGTCTCTCCAAGGAATGACAGCCCTTGTCACCGGTGGAACCCGCGGAATCGGGCACGCCATTGTGGAGGAACTGGTTGGGTTTGGAGCAAGAGTGCACACGTGTGCAAGGAACGAAGCTGAGCTCACCAAGTCTCTCATCCAATGGAATGATTCTGGTTTTGATGTTACTGGCTCTGTTTGCGATGTCTCTGTCCCTCATCAGAGGGAGAAGCTGATGGACTCTGTGTGTTCTCAATTCCAAGGAAAACTCAACATCCTTATAAACAATGTAGGGACAAACATTAGGAAACCAATGACAGAACTCACTACTGCAGAGATTTCCAGACTCATGGATACCAATTTAGGGTCCACCTTTCATATATGCCAACTTGCATATCCACTTCTGAAAGCATCTGGAATTGCAAGTGTTGTGTTTGTCTCGTCGGTTTCTGGTTTCGTCTCCCTGAAGTCCATGTCGGTTCAAGGAGCAACCAAAGGAGCAATTAATCAACTTACAAGGAATCTAGCTTGTGAGTGGGCAAAGGACAATATAAGGAGTAATGCAGTTGCACCCTGGGTTCACCGTGGCATGGAGTATGTGGAAGAGGTGTACTCGAGAACCCCACTTGGGCGACTAGGAGATCCAGCAGAAGTGTCTTCTGTTGTTGCTTTTCTGTGCTTACCAGCATCATCATACATCACTGGCCAGATTATTTGTGTTGATGGAGGGATGACCGTAAATGGATTCTACCCAACTCATACATAG 885 0.4678 MEKEDMVALALHTPSLSLSLSKLRRTTSHSHSNSITMLHAPPTHPKWSLQGMTALVTGGTRGIGHAIVEELVGFGARVHTCARNEAELTKSLIQWNDSGFDVTGSVCDVSVPHQREKLMDSVCSQFQGKLNILINNVGTNIRKPMTELTTAEISRLMDTNLGSTFHICQLAYPLLKASGIASVVFVSSVSGFVSLKSMSVQGATKGAINQLTRNLACEWAKDNIRSNAVAPWVHRGMEYVEEVYSRTPLGRLGDPAEVSSVVAFLCLPASSYITGQIICVDGGMTVNGFYPTHT* 295
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0490 294 PANTHER TROPINONE REDUCTASE-LIKE PROTEIN, CHLOROPLASTIC 29 293 - -
Amo13g0490 294 PRINTS Glucose/ribitol dehydrogenase family signature 201 220 IPR002347 -
Amo13g0490 294 PRINTS Glucose/ribitol dehydrogenase family signature 248 268 IPR002347 -
Amo13g0490 294 PRINTS Glucose/ribitol dehydrogenase family signature 128 139 IPR002347 -
Amo13g0490 294 PRINTS Glucose/ribitol dehydrogenase family signature 175 191 IPR002347 -
Amo13g0490 294 PRINTS Glucose/ribitol dehydrogenase family signature 53 70 IPR002347 -
Amo13g0490 294 PRINTS Glucose/ribitol dehydrogenase family signature 222 239 IPR002347 -
Amo13g0490 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 128 139 IPR002347 -
Amo13g0490 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 181 189 IPR002347 -
Amo13g0490 294 PRINTS Short-chain dehydrogenase/reductase (SDR) superfamily signature 201 220 IPR002347 -
Amo13g0490 294 Gene3D - 37 290 - -
Amo13g0490 294 Pfam Enoyl-(Acyl carrier protein) reductase 60 285 - -
Amo13g0490 294 PANTHER TROPINONE REDUCTASE 29 293 IPR045000 GO:0016491
Amo13g0490 294 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 50 287 IPR036291 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0490 Amo-Chr13 6324616 6325965 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0490 46 293 Miscellaneous Gene Families AT2G29290 62.016 5.40e-113 325
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0490 K08081 - gmx:100799534 416.001
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0490 13 6324616 6325965 Amo13g0490 13 6324616 6325965 ECH