Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0489 ATGGCTCCAACTCTTACTTCCAATTCATCTCTCTTACCTCACTCATCAACAAGGTTCACCCTCCCCAGGAACCAAAGGCTGAGAGTATTAGCTAAGAGTAACAACAATGGTCCATTCCCATCACTCAGGCTTGGTAAACCCAAGGATAATGATGATAATGATGGTGAAGAAGCTTCATCAAACTCCAATCCCTTCCGTTTCAACTTCGGCAAGTTACCTGATGTGACGTCATTGATCCCTGTTGTAAACAACCCTTCCTCTTCCTCTTCACCTGGTTTGTCATTTGGCAACCCAAGAAGGAAGGACCCTTCCACTGTGTTTGTTGCCGGTGCTACCGGCCAGGCCGGTATTCGCATTTCTCAGACACTTCTCAGAGAAGGTTTCAGCGTCAGAGCTGGTGTTCCCGAACTTGGTGCTGCTCAAGAACTTGCTCGTCTTGCTGCTCAATACAAGATCATATCAAAAGAAGAGGCAAAGCGTCTCAATGCTGTGCAATCAAGCTTTGATGATGCAGACTCCATAGCCAAAGCAATAGGCAATGCCAGCAAAGTTGTTGTCACCATTGGGCCAACAGAGAATGGTCCAACGGCAGAGGTCTCCACAGCTGACGCCTTGCAAGTAGTTCAGGCTGCTCAGCTCGCCGGCGTAGGCCACGTGGCTGTTATCTACGATGACAACAACGCCACCACCACCTCAACCTACAATGTCCTTGATGGCATCACCTCATTCTTCAACAATATATTCTCCAAGAATCAACCATTGAGCATACAAGAGTTTTTGCAGAAAGTTATTGAGACTGATGTCAAGTATACCTTCATCAAGACCAGTTTAACCGATGATTTCTCACCGGAGAGCTCTTATAATGTCGTCGTGTTAGGCGAAGGGAGCGCCAGTGCAAGCGACTATAAAGTTGCAAAGTCCAAGATAGCATCCTTAGTTGCTGATGTCTTCTCCAACACAGAGGTGGCAGAAAACAAGGTTGTGCAAGTGTATACAAGTCCAGAAGCCCCCTTGAAGCGTGTAGATGAATTGTTTAGCACTATTCCTGAGGATGGAAGAAGGAAAGCCTATGCTGAAGTGCTCGAGAAAGCGAAAGCAGAAGAGGAGGCAAGATTGGCTGCTGAAAAGGCCCAAGAAGCTGCAGAAGCAACAAAGAAGCTGGAAGAAGAGGTGAAAAAGCTTTCGCAGCAAGAAGCCCGTGCTGCGAGTCTAGCTCAAGAAGCTCAAGATAAGGCAGTGGCTGCCGGGGCTTCAGTGGAAGGCCTCTTCAGCAAGGCCAAAGATTTCGGAGCAGGGCTTTCCTGGCAAAAGTTTAGCTCACAGATCTCGGCCTCAATTCAAAACGCCGGTGAGGACGAGGAACCAAATATTAAACTGGCCACTGTTCGGGGACAGGCCAAGGCTCGGAGCCTTACGCCTAACAAGGCAGTTGTGAAGCAAACAAGTACTCGAAACATCACCACTAAACCGAAGGAGGAAAAGCCAAAGCAAGCAGAGAAACCCACAGAGGTGAGGAAGGTATTTGGTGGCCTATTCAAGCAAGAAACTATCTATGTCGACGATGATTAG 1569 0.4786 MAPTLTSNSSLLPHSSTRFTLPRNQRLRVLAKSNNNGPFPSLRLGKPKDNDDNDGEEASSNSNPFRFNFGKLPDVTSLIPVVNNPSSSSSPGLSFGNPRRKDPSTVFVAGATGQAGIRISQTLLREGFSVRAGVPELGAAQELARLAAQYKIISKEEAKRLNAVQSSFDDADSIAKAIGNASKVVVTIGPTENGPTAEVSTADALQVVQAAQLAGVGHVAVIYDDNNATTTSTYNVLDGITSFFNNIFSKNQPLSIQEFLQKVIETDVKYTFIKTSLTDDFSPESSYNVVVLGEGSASASDYKVAKSKIASLVADVFSNTEVAENKVVQVYTSPEAPLKRVDELFSTIPEDGRRKAYAEVLEKAKAEEEARLAAEKAQEAAEATKKLEEEVKKLSQQEARAASLAQEAQDKAVAAGASVEGLFSKAKDFGAGLSWQKFSSQISASIQNAGEDEEPNIKLATVRGQAKARSLTPNKAVVKQTSTRNITTKPKEEKPKQAEKPTEVRKVFGGLFKQETIYVDDD* 523
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0489 522 MobiDBLite consensus disorder prediction 1 40 - -
Amo13g0489 522 MobiDBLite consensus disorder prediction 80 101 - -
Amo13g0489 522 MobiDBLite consensus disorder prediction 1 67 - -
Amo13g0489 522 Coils Coil 358 411 - -
Amo13g0489 522 MobiDBLite consensus disorder prediction 80 95 - -
Amo13g0489 522 PANTHER PROTEIN PLASTID TRANSCRIPTIONALLY ACTIVE 16, CHLOROPLASTIC 1 522 - -
Amo13g0489 522 MobiDBLite consensus disorder prediction 486 502 - -
Amo13g0489 522 MobiDBLite consensus disorder prediction 470 502 - -
Amo13g0489 522 Pfam NAD(P)H-binding 110 319 IPR016040 -
Amo13g0489 522 SUPERFAMILY NAD(P)-binding Rossmann-fold domains 104 329 IPR036291 -
Amo13g0489 522 Gene3D - 92 343 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0489 Amo-Chr13 6317137 6319979 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0489 - - gmx:100801140 693.73
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0489 13 6317137 6319979 Amo13g0489 13 6317137 6319979 ECH