Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0488 ATGTCGGGCGGTTTCTTTCGGGGCACATCTGCGGATCAGGACACTCGGTTTTCGAATAAACAATTGAAGCTGCTGAAGTCGCAAAAGTTTGCCCCCGAATTGGAGCACCTGGTGGACATGACAAAGGTGAACATGGAGGTGATGAAGCCTTGGATCACCAGAAGGGTGACTGAGCTTCTCGGGTTCGAAGATGAAGTGCTTATTAACTTTATACACAGTCTGCTTGATGCGAAGGAAGTGAATGGGAAGGAAATCCAGATACAACTTACTGGGTTTATGGAAAAAAACACTGGAAAGTTCATGAAAGAGCTTTGGACGCTTCTTCTCAGTGCACAGAAAAATGCCAGTGGTGTTCCTCAGCAGTTCTTGGATGCCAAAGAAGAAGAACTCCGGAAGAAGAAGGTTGAAAATGATAAAATAACTAGTGAAATTCAGAGGAAAAGAGAGAAAGAAGATAGAGAGTTCATGGAAGTGAGGCTGAAAAAACTGGACGGTGGATTTGATGCGAAGGATAATGATACTGCTTTGGACTCAACCACAGGGCACTATGTTCAGGATGGAAAAGAAAGTGACAAGAGGAATGGTGTTAGAGGAAGGAGCAGGGTTTCTAGGTCCCCCCGCTCACCTGCTGTTTCTGTTTCGCCTAATCGCAGAGGCTCGCCTTCAAGGTCAATGAGTAAATCATTTTCAAATTCACGAAGCTATTCGGGTGGTAGACATAGATCGAGGAGTATATCTAGGTCTCCAGAAGCTAGAAGACGCTCCCCATCTTCTGATAGGATTCGCCGTTCTCCACGACGACGATCCATTTCTCCTCGGAGGTATTCACCTAGGCGATCCCCTTACCGGAGGCCTCCATATTCAAGGAGAAGATCTAGATCCCGCTCAACTTATAGATCTCCTTCTCCTCTACGACGTAGAATGCATTCCCCCTACCGTCGTAGTTCACCCTCTTACCGTCGACGCAGATCACCTTCTCCTGTGAAAAGACGCAGATCGCCTTCTCCAATGCGTCGACGTAGATCTCCTTCACCAATCCGTCGACGTAGATCACCTTCTCCAGTGCGTCGACGCAGATCACCCTCTCCTGTAAGGCGACAAAGGTCACCCTCTCCACTGCGACGTCGATCTCCCATCACGCGGTATAGATCTCCACCTGTGCGCCGAATGCCTCCAACCCATCTACGGTCTAGATCAGGATCTCCCATGCAATCCACTTCTCCCATACGTCGAAGGGACGGGAGTCAAAGTCCACAACGCAGATCTCCATCTCCTCTGCGGCGTAGATCACCTGGTTTTGTTAAGAGAAGATCACCAAGTCCTTCTCCGAGGAGGTCTCCTCCAAATGAATGGAGTTCTCAGTCCCCAGCACGGCATGTATCTACATCTCCAGTAAAGAGAACTTCGTCAAGACGTCAAAGAAGTCCTGTGCAGCCTTCTAGGGGGAGAGTCAGAACACCGGAAGAATTGTCACCTGTGGCGCATCAACACCCAAAAGATAAGGATCATAAAGCTTCACGCACTAAATCGCCGGACTCAGTTTCGTCAGGTGAGAAGTCTCCACCACGATCAGTGTCTCCACAACCAAGGAGGAGGAATAGCAGTGAAGACAGGAGTCCACCGAAGAGCCCGGTGAGGCAAAGAAGAGACAAGTTGACCCATGAAAGAAGCTCGAGTCCTCCAAAGAGACCAAGAACCCAGAAACCTCGCCATGATAGCCCAGAGACAAGCGAAGATGCAGAAGGAACATACCATTCTAGAGACAACAGAGATCCTAATTCAAAGTCATCCGGAAAGAGAACAAAGTATTTATCCCCAGTTAGTAAGCGGAAAAACTCACCTGCAAAGTTTCATGATGAGGAAGATTTCTCTCCCGAAATGGCAGCTGGTCGCGTTTCTTCTGGGTCTCGTCACTATGATAACACTGACGGGAGTAGGAAAGGGCGAGAGATTAAAGGTGATATTTCTTCTGGAAAAGGTGATGAATCTTATGTGCGACCTAAATCGCCAAGGAATAAAGAAAGTTATTCCAGTGAGAAGCCTCATGAATCTTATGCTGTAGATACTAAGAAGTCTGATGACAAGGATCATTCTCTTTCAAACTATGCAAAAAATAGTGATAGGCGCTACAAATCAGAAGCAACTCGAGATTTAGTTGGAAAAGTTGATCGTGTCAATCATAGTGCTTCCTATGATTCTGTTTCTGAGGAAAGTGACAAACATAGAAGGGAAGGGAAGGAAAAGAGAAAACATAGAAAGTCAGAGAAAAAAGTTGTGTCATCGGATGAAGATTATAGTTCTGATTCTGAAATGGAGGACAGGAAAGATGCTAAGAGGAGGAAAAAGGAGGAGAAGAAGCTGCGGAAGGAGGAGAAACGTCGAAGACGGGAAGAGAAAAGACGCCGAAGGGAAGAACGGCGAGCAGAGAAGCTGAAAATGAAGGGTAAAACTGACTATAGTTCAGACGATGAGGAAGCTGAACGAATGGATCATCGTCGTAGTGATAATGACGAGATGTTGTCTGAACAAAAGAAGCTTGAGATTGAGTTGCGGAATAAGGCTCTTGAATCTCTCAAAGCAAAGAAGGGCATGAATAACTGA 2601 0.4656 MSGGFFRGTSADQDTRFSNKQLKLLKSQKFAPELEHLVDMTKVNMEVMKPWITRRVTELLGFEDEVLINFIHSLLDAKEVNGKEIQIQLTGFMEKNTGKFMKELWTLLLSAQKNASGVPQQFLDAKEEELRKKKVENDKITSEIQRKREKEDREFMEVRLKKLDGGFDAKDNDTALDSTTGHYVQDGKESDKRNGVRGRSRVSRSPRSPAVSVSPNRRGSPSRSMSKSFSNSRSYSGGRHRSRSISRSPEARRRSPSSDRIRRSPRRRSISPRRYSPRRSPYRRPPYSRRRSRSRSTYRSPSPLRRRMHSPYRRSSPSYRRRRSPSPVKRRRSPSPMRRRRSPSPIRRRRSPSPVRRRRSPSPVRRQRSPSPLRRRSPITRYRSPPVRRMPPTHLRSRSGSPMQSTSPIRRRDGSQSPQRRSPSPLRRRSPGFVKRRSPSPSPRRSPPNEWSSQSPARHVSTSPVKRTSSRRQRSPVQPSRGRVRTPEELSPVAHQHPKDKDHKASRTKSPDSVSSGEKSPPRSVSPQPRRRNSSEDRSPPKSPVRQRRDKLTHERSSSPPKRPRTQKPRHDSPETSEDAEGTYHSRDNRDPNSKSSGKRTKYLSPVSKRKNSPAKFHDEEDFSPEMAAGRVSSGSRHYDNTDGSRKGREIKGDISSGKGDESYVRPKSPRNKESYSSEKPHESYAVDTKKSDDKDHSLSNYAKNSDRRYKSEATRDLVGKVDRVNHSASYDSVSEESDKHRREGKEKRKHRKSEKKVVSSDEDYSSDSEMEDRKDAKRRKKEEKKLRKEEKRRRREEKRRRREERRAEKLKMKGKTDYSSDDEEAERMDHRRSDNDEMLSEQKKLEIELRNKALESLKAKKGMNN* 867
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0488 866 MobiDBLite consensus disorder prediction 802 839 - -
Amo13g0488 866 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 1 411 - -
Amo13g0488 866 PANTHER SERINE/ARGININE REGULATED NUCLEAR MATRIX PROTEIN 366 863 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 756 784 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 612 626 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 243 265 - -
Amo13g0488 866 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 366 863 - -
Amo13g0488 866 PANTHER SERINE/ARGININE REPETITIVE MATRIX PROTEIN 1 1 411 - -
Amo13g0488 866 SUPERFAMILY PWI domain 25 133 IPR036483 GO:0006397
Amo13g0488 866 Coils Coil 123 150 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 184 198 - -
Amo13g0488 866 Pfam PWI domain 46 115 IPR002483 GO:0006397
Amo13g0488 866 MobiDBLite consensus disorder prediction 640 723 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 510 529 - -
Amo13g0488 866 SMART pwi_2 40 114 IPR002483 GO:0006397
Amo13g0488 866 MobiDBLite consensus disorder prediction 166 839 - -
Amo13g0488 866 ProSiteProfiles PWI domain profile. 27 125 IPR002483 GO:0006397
Amo13g0488 866 MobiDBLite consensus disorder prediction 205 242 - -
Amo13g0488 866 Coils Coil 836 856 - -
Amo13g0488 866 Gene3D PWI domain 33 125 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 488 509 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 785 801 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 266 372 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 530 597 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 447 480 - -
Amo13g0488 866 MobiDBLite consensus disorder prediction 397 424 - -
Amo13g0488 866 Coils Coil 774 814 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0488 Amo-Chr13 6304387 6310417 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0488 K13171 - gmx:100810238 468.003
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0488 13 6304387 6310417 Amo13g0488 13 6304387 6310417 ECH