LGRPv2

Gene search

Sequence information

Select	Gene	Cds	Cds_length	GC_content	Pep	Pep_length
	Amo13g0486	ATGGCTCAACTCGAACGCCCTCAGAGACCTGGTGTTGAAACTTCAAAAACTCCCACCATCCATACCATGGAACAACTCCTCCGAGGAGAAGGGTCTAAAGTGTCACCAAAAGGTTCTAAGCTATCGCCAACAGGTTCTAAGATGTCAACCAACACTGCCACCTTGTCCTCCTCCTCCACCTCCTCCACTTCTAATTCATCACCTTTTTTCAATAAGTTGAGGCACCATGACTCGGAAGAAGACCATAGCCCGAACCAGAAGAAATCAGTCCTTGCCAAAGTGAAGGAGAAGGCTAAGAAATTGCGTCACAGCCTCAGCAAGAAAAAGCACGACGATGGAAACCAAACTCCCTCACCCAGCTCTGGCTTGGAAGACGAAATAACACACGACGAAGCTGAATACCATGGAGCTCCAATGTACGAATCTGAGAAGGCACATCAACCAAAATCAGGTCTAGGAATGCAAGAAAAATGTTTAACTCGGTCCTTCTCCAAGAGAACAACTCATCCAGCAACTGTGGCTAATGCTGCAGCTGGAGCTGCTACTAGCACCAATACTATTGATGCTGGTTCGAACAGGGTAGCGACGACTAGAACCTTAGCTCATGAACTGAACAAAGGATCACATTCTATGACTTCCAAGTTTCAAGGCCTCACTATTTACAAACCTGATGAGCTTCACACTTCAACATCACCAAAGGATGGAACTCAAAGTAGTTTTTTTGTTTCTGCTCCAAGTACACCTCCAAAGACATCTTCCCAAACTTCTCCAAGCGCAGCACGAATTTGGTCAGCTCCAGTGACCCCAAAAACTTTGGCTCCAGTGTCACCACAGACTCCTTCATGTTCATCTGCTCCAACCACTGGCAGGTATGCCAGCCCTGGCTCGCAGATATGGGATAAGGGTGTTTCGGTGAAAGAGTACTTGATGAACAAGCTTGAGCCGGGAGAAGATGAAAAAGCTTTGTCTCAGGTGATATCTGAGGCCATGAGTCCAAAGAGAACTCCAGGTGATGCAGGTGTGATGGAGAAGGTGAGAGAAGCTGTAACTTCTTTGCTCCGAACCGAGGAACCAAAACAAGAAGACACAACAACCACTATCACGACCACTGACACCAACATTGCAAGCACATCCTATCAAAACCCAGTATCTATCAGTGCTGCTCGCAGTTCATCTCAAATTCCAGTATCTACCAATGCTCTAGAAGTGGTTCAGGAAGAAAACCATGAAAGAATTCTTCAGGCAAATTGA	1251	0.4628	MAQLERPQRPGVETSKTPTIHTMEQLLRGEGSKVSPKGSKLSPTGSKMSTNTATLSSSSTSSTSNSSPFFNKLRHHDSEEDHSPNQKKSVLAKVKEKAKKLRHSLSKKKHDDGNQTPSPSSGLEDEITHDEAEYHGAPMYESEKAHQPKSGLGMQEKCLTRSFSKRTTHPATVANAAAGAATSTNTIDAGSNRVATTRTLAHELNKGSHSMTSKFQGLTIYKPDELHTSTSPKDGTQSSFFVSAPSTPPKTSSQTSPSAARIWSAPVTPKTLAPVSPQTPSCSSAPTTGRYASPGSQIWDKGVSVKEYLMNKLEPGEDEKALSQVISEAMSPKRTPGDAGVMEKVREAVTSLLRTEEPKQEDTTTTITTTDTNIASTSYQNPVSISAARSSSQIPVSTNALEVVQEENHERILQAN*	417

Annotation information

Select	Seq ID	Length	Analysis	Description	Start	End	IPR	GO
	Amo13g0486	416	MobiDBLite	consensus disorder prediction	37	71	-	-
	Amo13g0486	416	Coils	Coil	91	111	-	-
	Amo13g0486	416	PANTHER	LOW-TEMPERATURE-INDUCED 65 KDA PROTEIN-RELATED	55	416	IPR037491	GO:0009737
	Amo13g0486	416	MobiDBLite	consensus disorder prediction	1	191	-	-
	Amo13g0486	416	MobiDBLite	consensus disorder prediction	160	191	-	-
	Amo13g0486	416	PANTHER	LOW-TEMPERATURE-INDUCED PROTEIN	55	416	-	-
	Amo13g0486	416	MobiDBLite	consensus disorder prediction	223	262	-	-
	Amo13g0486	416	MobiDBLite	consensus disorder prediction	223	295	-	-
	Amo13g0486	416	MobiDBLite	consensus disorder prediction	355	374	-	-
	Amo13g0486	416	MobiDBLite	consensus disorder prediction	271	294	-	-
	Amo13g0486	416	MobiDBLite	consensus disorder prediction	124	142	-	-
	Amo13g0486	416	MobiDBLite	consensus disorder prediction	72	92	-	-

Duplication type information

Select	Gene	Chromosome	Start	End	Duplicated_type
	Amo13g0486	Amo-Chr13	6286301	6287859	Wgd

Pathway information

Select	Query	KO	Definition	Second KO	KEGG Genes ID	GHOSTX Score
	Amo13g0486	-		-	adu:107477082	701.049