Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0384 ATGGCGCCATTGAAGAGTATGGAGAAAGAGTATCCTCTCATTGATTCTCACTTTCAAAGCTTTTGTGCTTCTCACGCCATTTTCTCCCTTGAAGATTTCCTCCTCTACGATCTCCATGCATTAATCGCTTCCGCAGATAATCACTCCTCATCAATCACCTTCAAGCAGGGAATTGATCAGCTCCTGTCAGTGATTGATACTCAGCTGCCACCATTGATGAACGGGTTGCAGCTCTTGGAAGATGCTGAATGCAATAAGCGTCTTTTGCCCACTGGATTCAAAGGGATAGATGCTTTGCTTGGAGGAGGCTTACGTGCAGGACAATTAACTGAACTTGTTGGTCCATCCTCTTCTGGTAAGACACAGGCTTGCCTAACATCTGCTTCAACAGTTGCAAAGAATGGTGGTTCAGTTATATACTTTGATACAGGCAACTCCTTTTCACCTCAGCGTATTGCACATTTGGTTGGTCAGACCTCTGGTTATGTCATTGGCAATCAGGCTGAACCAGGACCTCTGCAGAAAGTAATGGAGAGGATAATATGCTACTCAGTGTTTGACATCTATCAAATGTTTGATGTGTTGCAGCAACTGAAGATAAATTTGAAATCTAAGATTGTTGAACCAGATCGTCGCGTTCAATTGCTTATTGTTGATTCAATCTCTTCACTGATCACCCCCATCCTTGGGGGCAGTGGTCCTCAAGGACATGCTTTGATGATATCTGCTGGGTATTTACTGAAGAAGTTAGCAGATGAGCATAATATTGCAGTACTGGTAACAAATCATATGGTGGCTGGAGAAGGCGGTACGTCCAAACCAGCACTTGGAGAGAGTTGGAAGAGTGTTCCACATATACGGCTCTTGCTTTCTCGTGAATATGGTAGCAATGTTTGCAACATATCAACACTAAAACATCCATCTGTGGCTTCTGACAGGGCTGCTAAGTGTGTACTATGTATTTGTGACTGCTAA 975 0.4349 MAPLKSMEKEYPLIDSHFQSFCASHAIFSLEDFLLYDLHALIASADNHSSSITFKQGIDQLLSVIDTQLPPLMNGLQLLEDAECNKRLLPTGFKGIDALLGGGLRAGQLTELVGPSSSGKTQACLTSASTVAKNGGSVIYFDTGNSFSPQRIAHLVGQTSGYVIGNQAEPGPLQKVMERIICYSVFDIYQMFDVLQQLKINLKSKIVEPDRRVQLLIVDSISSLITPILGGSGPQGHALMISAGYLLKKLADEHNIAVLVTNHMVAGEGGTSKPALGESWKSVPHIRLLLSREYGSNVCNISTLKHPSVASDRAAKCVLCICDC* 325
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0384 324 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 88 311 IPR027417 -
Amo13g0384 324 ProSiteProfiles RecA family profile 1. 85 264 IPR020588 GO:0003677|GO:0005524|GO:0006281|GO:0140664
Amo13g0384 324 PANTHER DNA REPAIR PROTEIN RAD51 HOMOLOG 4 1 317 - -
Amo13g0384 324 Pfam Rad51 89 301 IPR013632 -
Amo13g0384 324 Gene3D - 70 321 IPR027417 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0384 Amo-Chr13 5201110 5205599 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0384 K10871 - gmx:100780427 457.988
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0384 13 5201110 5205599 Amo13g0384 13 5201110 5205599 ECH