Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0381 ATGAAACTAATGGATCTGTTTTGTTCTTCAAATTCTTCCACAGCAACCTCAAGCATGCACCAACATCATCATGGTTCTATGGTACCAAAGAGGAGCAAAAAGACCCAGTTACCCAACATTGTTCTCCCTTGTTCATCTTCTTCTTCCCAATTGATACCACTGAATCCAAAGCCCAGAAAGAGTACTAGTCGTTGTTCATCATCATCGAACATGGGTGAAGTAGTGATGAGAAGACATAGCTCTGTTGAACTTAGAGACTTATATACTACTAGTGGTTCATCAAGAAGATATCTCCTTGCTACTGACACCATTCAAAGGGTTTCTGACTCAGCTAACAACTCTTTGGTTCTTTCTCATGATAATTATAAGCCCCACCAAAGAGATCATCATCTTCTTAGATCATCTTCTGTTCGTTCAACAAACCAGGTTGTGGTATTGAGGGTATCATTGCACTGCAAAGCATGCGAAGGAAAACTTAGAAAACATATATCAAGAATGGAAGGAGTGAGATCATTCAGCATAGACATGGAGACAAAGAAGGTGACAATCATTGGTGACGTCACGCCATTAGGGGTATTGGCCAGTGTTTCCAAGGTCAAGAATGCTCATCTCTGGCCATATCCATCCACCACATCATCATCATCATGA 648 0.409 MKLMDLFCSSNSSTATSSMHQHHHGSMVPKRSKKTQLPNIVLPCSSSSSQLIPLNPKPRKSTSRCSSSSNMGEVVMRRHSSVELRDLYTTSGSSRRYLLATDTIQRVSDSANNSLVLSHDNYKPHQRDHHLLRSSSVRSTNQVVVLRVSLHCKACEGKLRKHISRMEGVRSFSIDMETKKVTIIGDVTPLGVLASVSKVKNAHLWPYPSTTSSSS* 216
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0381 215 ProSiteProfiles Heavy-metal-associated domain profile. 142 202 IPR006121 GO:0046872
Amo13g0381 215 PANTHER HEAVY METAL-ASSOCIATED DOMAIN CONTAINING PROTEIN, EXPRESSED 1 215 - -
Amo13g0381 215 MobiDBLite consensus disorder prediction 51 72 - -
Amo13g0381 215 Pfam Heavy-metal-associated domain 146 192 IPR006121 GO:0046872
Amo13g0381 215 SUPERFAMILY HMA, heavy metal-associated domain 141 199 IPR036163 GO:0046872
Amo13g0381 215 MobiDBLite consensus disorder prediction 13 34 - -
Amo13g0381 215 CDD HMA 145 198 IPR006121 GO:0046872
Amo13g0381 215 PANTHER OS08G0405700 PROTEIN 1 215 IPR044526 -
Amo13g0381 215 Gene3D - 139 203 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0381 Amo-Chr13 5178230 5179908 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0381 - - adu:107477152 409.068
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0381 13 5178230 5179908 Amo13g0381 13 5178230 5179908 ECH