Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0373 ATGGACGAAGAATTGCTTGAGCTTCAGCGACAATTCCAATTCGCTCAGCAAGCCAAGTCCAGCATTCGATTATCTGAGCGAAACGTCGTCGAGTTGATCCAAAAGCTTCAACAACTCCAAATCATCGATTTCGAGCTCCTTCACACCGTTTCTGGCAAAGAATACATCACTCTCGATCAATTGAGGAACGAGATGGTTTCTGAGGTTAGAAAATTAGGGCGCGTTTCGGTGATTGACCTTGCGGACACTACTGGTGTTGACTTGTACTATGTTGAGAAGCAGGCTCAGCGCATTGTGGCGGATCACGCTGAGTTCATGCTGAATCAGGGGGAAATCATGTCCGAATCGTACTGGGATTCGGTCGCCGAAGAGGTTAACGAAAGGCTTCAAGAATGCAGCCAGATCGCGCTCACGGAACTCGCCGCACAGCTTAATGTTGGATTGGACTTGGTTGCATCCGTGTTGGAGCCGCGACTCGGCACTATGGTGAAAGGAAGGCTTGAGGGAGGGCAATTGTATACTCCCGCCTATGTGGCCCGCATGAATGCAATGGTTCGGGGGGCAGCAAGGGGAATCACAGTGCCAACAAATTTGACGGTGTTGTGGAGCTCATTGCAGCAGTTACTGCAGGAAATGGGCGGAACCGGTGGTGTGGCGGTTGATGGATCTTTCTTCCAATCTTTGTTTAATGGACTTGTGAAGGAAGGCGAGATTCAAGGATCAGTTCGTGCAGGAGTACATTGGACACCAGCTGTGTTTGCCATTGCTCAGAAGGAATCTGTGGATTCATTTTTTTCACAGAATTCTTTTATCAGCTATGAGGTTCTGCACAAACTTGGAATTCCACAGCCCATTCAGTTCTTGCAGTCCAGATATCCTGAAGGAAAACCTCTAGTCACAACATTTGTTCACCAATCTATGATTGACATGTTAGATGCTGCTACTGAGGATGCTATTGAACGTGGTAGTTGGAGTGATTCTCTTTCCTTGTTGCCCTCATCTTTCACACCTCAAGATGCAGCTAAAATGCTGTCCCTCTGTCAATCTGTTCAATTGGCTCTCAAGTCTAATAAAGCGCACATTTTTGGAGAATTTTATGTATTAAGCAGCAGCTTTATGAAGGACATATGTGATCGCGTGGTGAAAGAGTTGGAGACATTAGGTGTTTCAGGGTCTTTTGGCTCTAAGATGTCTGATGATCTACAAGTAACCAATGAAGCAAAAGATACGATTCAGGAAGGTTGA 1245 0.4627 MDEELLELQRQFQFAQQAKSSIRLSERNVVELIQKLQQLQIIDFELLHTVSGKEYITLDQLRNEMVSEVRKLGRVSVIDLADTTGVDLYYVEKQAQRIVADHAEFMLNQGEIMSESYWDSVAEEVNERLQECSQIALTELAAQLNVGLDLVASVLEPRLGTMVKGRLEGGQLYTPAYVARMNAMVRGAARGITVPTNLTVLWSSLQQLLQEMGGTGGVAVDGSFFQSLFNGLVKEGEIQGSVRAGVHWTPAVFAIAQKESVDSFFSQNSFISYEVLHKLGIPQPIQFLQSRYPEGKPLVTTFVHQSMIDMLDAATEDAIERGSWSDSLSLLPSSFTPQDAAKMLSLCQSVQLALKSNKAHIFGEFYVLSSSFMKDICDRVVKELETLGVSGSFGSKMSDDLQVTNEAKDTIQEG* 415
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0373 414 Pfam E3 UFM1-protein ligase 1 4 288 IPR018611 GO:0061666|GO:0071569
Amo13g0373 414 PANTHER E3 UFM1-PROTEIN LIGASE 1 1 408 IPR018611 GO:0061666|GO:0071569
Amo13g0373 414 Coils Coil 22 42 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0373 Amo-Chr13 5081423 5084240 Dispersed
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0373 1 395 EF-hand Containing Proteins AT3G46220 69.620 0.0 575
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0373 K22755 - gmx:100808087 672.93
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0373 13 5081423 5084240 Amo13g0373 13 5081423 5084240 ECH