Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0371 ATGCTAGGGAACTCTTATCCCAATGCTGGTGGTCCACTTTCACAAAGCCATGTTATGGGTATGTTGAATGATGTAAACTCGAGTGATAATTCTCCTTTTGACATGAATGACTTCCCTCAACTGACTAGTCGACCTAGTTCTGCTGGAGGGCCTCAAGGACAATTGGGTATATGGGGAGGTCTGCTGGTTTTAGCTTGGGGGGAACATATTCATCACATCGTACACAACAGCAACAACAACATGCTCCTTCGGATGAGTGATCCAGACTTGACATCTCTTGCACTTGGAATTGATCTTACTACACTTGGATTAAATTTGAATTCATCAGAAAATCTACACAAGACGTTTGGGTCTCCATGGTCTGATGAACCTGCAAAGGGTGATCCAGAGTTTAATGTGCCACAATGTTATTACGCAAAGCAGCCCCCTGCTTTACATGTGAGGCACAATAGAGGTTGGTATTATCACAAAGAGAATCGTTTCTGGTTTATAAGAGTTCCCAACATGGAGCCGCTTGTTAAAACGAACACATACGAGAGAGGATCTTATCACTGTTTCGATCCAAACACATTTGAAACTGTTCGCAAGGTTAGCTTTATACATAATAGTATTCGTAGTGATAACTTTGTTCTACATTATGAAATGTTGGAAAAGAGACCGCCTCTACCACAGCATTGA 678 0.4174 MLGNSYPNAGGPLSQSHVMGMLNDVNSSDNSPFDMNDFPQLTSRPSSAGGPQGQLGIWGGLLVLAWGEHIHHIVHNSNNNMLLRMSDPDLTSLALGIDLTTLGLNLNSSENLHKTFGSPWSDEPAKGDPEFNVPQCYYAKQPPALHVRHNRGWYYHKENRFWFIRVPNMEPLVKTNTYERGSYHCFDPNTFETVRKVSFIHNSIRSDNFVLHYEMLEKRPPLPQH* 226
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0371 225 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 82 146 - -
Amo13g0371 225 MobiDBLite consensus disorder prediction 17 51 - -
Amo13g0371 225 PANTHER CCR4 NOT-RELATED 82 146 IPR040168 GO:0030015
Amo13g0371 225 PANTHER CCR4 NOT-RELATED 1 56 IPR040168 GO:0030015
Amo13g0371 225 Gene3D - 78 146 IPR038635 -
Amo13g0371 225 Gene3D - 147 225 IPR038635 -
Amo13g0371 225 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 149 225 - -
Amo13g0371 225 MobiDBLite consensus disorder prediction 19 50 - -
Amo13g0371 225 Pfam NOT2 / NOT3 / NOT5 family 149 200 IPR007282 GO:0006355
Amo13g0371 225 PANTHER CCR4 NOT-RELATED 149 225 IPR040168 GO:0030015
Amo13g0371 225 PANTHER NOT TRANSCRIPTION COMPLEX SUBUNIT VIP2 ISOFORM X1-RELATED 1 56 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0371 Amo-Chr13 5074368 5077454 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0371 K12605 - rcu:8264020 247.284
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0371 13 5074368 5077454 Amo13g0371 13 5074368 5077454 ECH