Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0347 ATGAAGGGATCACCATCAGATGAGATGATTCTTAGCTACAACGATGTTGTGCTTCGGCGTTATGATCTAACCATCCTCAACGGTCCGTTTTATCTTAATGATCGAGTTATCGAGTTGTATTTCAGCTATCTTCCATCTTGTTATCCCTCTCAGGATACCCTGCTGGTTCCACCCTCCATTGCATTTTGGATCATGAAATGTCCTGTTGCTGAGGCTCTCAAAGATTTCATAGAGCCTCTTCATTTGTCTGATAAGGAACTGGTTATATTCCCCATCAACGATAACGAAGATGTTGGTAAAGCTGAAGGTGGGTCTCACTGGAGCCTACTTGCGTATTACAGGCGTGCTAACAAGTTTGTTCACCATGATAGTTGCAGAGGCATGAACTCAGCACCTGCTAAGCAACTCTATAGAGCTGTTGGTGGATACATGGGGCAATCCGGATTGGCATCTGAACCTAGCTTTTTGGAATGGACTGATTCACCCCAACAAGAGAATGGTTATGATTGTGGTTTGTATGTCATGGCCATAGCAAGAGTGATATGCAACTGGCATGTAAACTGCAAAAATATTGATTTAACGGAGCTGTGGTTCCCTGATGTGAAGGAACAGGTTACTCCAATTGCGGTTGCCGAGATGCGGGGTGAGATCTTGACCTTGGTTAAAAAGCTAATGGCAACAAATCAAAACTCTTGA 696 0.4368 MKGSPSDEMILSYNDVVLRRYDLTILNGPFYLNDRVIELYFSYLPSCYPSQDTLLVPPSIAFWIMKCPVAEALKDFIEPLHLSDKELVIFPINDNEDVGKAEGGSHWSLLAYYRRANKFVHHDSCRGMNSAPAKQLYRAVGGYMGQSGLASEPSFLEWTDSPQQENGYDCGLYVMAIARVICNWHVNCKNIDLTELWFPDVKEQVTPIAVAEMRGEILTLVKKLMATNQNS* 232
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0347 231 PANTHER SENTRIN-SPECIFIC PROTEASE 8 159 225 IPR044613 GO:0019784
Amo13g0347 231 PANTHER SENTRIN-SPECIFIC PROTEASE 8 8 151 IPR044613 GO:0019784
Amo13g0347 231 SUPERFAMILY Cysteine proteinases 7 224 IPR038765 -
Amo13g0347 231 Gene3D Adenoviral Proteinase; Chain A 6 227 - -
Amo13g0347 231 ProSiteProfiles Ubiquitin-like protease family profile. 16 181 IPR003653 GO:0006508|GO:0008234
Amo13g0347 231 Pfam Ulp1 protease family, C-terminal catalytic domain 78 181 IPR003653 GO:0006508|GO:0008234
Amo13g0347 231 PANTHER PROTEASE, SENP8, PUTATIVE-RELATED 8 151 - -
Amo13g0347 231 PANTHER PROTEASE, SENP8, PUTATIVE-RELATED 159 225 - -
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0347 K08597 - gmx:100800268 361.688
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0347 13 4697526 4699230 Amo13g0347 13 4697526 4699230 ECH