Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0340 ATGTCGGCACCGCAGAGGCTTCTCTGCAGTCTCTCTTCCAGAACCTTCCTCTTACTTCCATTTTCCCATCCCTACAGAACTCTCGCTTCTCCTCCTTCTCCTTTCTCACTCATCCCAATGCCTCGCAATCAGCGGAGGGGACAACAATGGAAGGAGAAACCGAAACGCGAAGGGGAATTATCGGCTGCGGCTGGGGGAGGTGCAACTACTTCTGGTTCAGCTGAAACAGTTACTAACGGCCTTGCCGGGTTGCGTATTGCTGAAAGCGGGGCGGCGAAAACCAGTGTTGGAGCTGGTGGCCAAGATAGGAAGGTGATTTGGAAACCGAAATCTTATGGAACTGCGAGTGGAGTCGCAACTGCCGAAGCTGAAATGGCTGGTAAAGGTGCAGCTGATGCTGCTGCTGCTGCAGGGGCTGAAGCTGTTGTGGCTTCGCCCAAAACGAGTGGTAGTCCCAGTTTGAGCAAGTTGTTTAGCGGTAATTTGTTGGAGAAATTTACTGTGGACAACAACACATACTCGCAGGCGCAAATCAGAGCTACTTTCTACCCGAAATTCGAGAATGAGAAGTCAGATCAAGAGATAAGGATAAGAATGATTGAGATGGTATCTAAAGGTTTGGCTACGTTAGAGGTTTCTCTCAAACACTCTGGTTCTCTTTTTATGTATGCGGGTCATGAAGGTGGAGCTTATGCGAAAAATAGTTTTGGAAATATATATACTGCTGTTGGTGTATTTGTACTTGGGCGGATGTTTCGCGAGGCTTGGGGAGCTGCGGCTTCTAAAAAACAAGCTGAATTTAATGATTTTCTTGAGAGAAACCACATGTGCATATCAATGGAACTTGTAACTGCTGTTCTTGGTGATCATGGACAGCGTCCCCGAGAAGATTATGCGGTAGTTACAGCAGTTACTGAATTGGGCAATGGAAAGCCAAGGTTCTATTCAACTCCTGAAATAATTGCTTTCTGCAGAAAATGGCGCCTACCTACAAATCACGTGTGGCTGTTTTCAACAAGGAAATCAGCATCATCCTTCTTTGCTGCCTATGATGCTTTATGTGAGGAGGGTACTGCAACACCGGTGTGCAAGGCTCTTGATGAAATTGCAGATATATCTGTACCAGGTTCTAAAGACCATATAAAGGCCCAAGGTGAAATTCTGGAAGGTCTCGTAGCTCGTCTTGTGAGTCATGATAGTCCAAATCATATGAAGAAAATTTTGAAAGAATACCCTTTTCCACCTGCTGATGGAGATGCCCTTGATTTGGGACCAAGTCTAAGGGAAATTTGTGCTGCAAATAGGTCTGATGAAAAACAGCAAATAAAAGCTCTTCTTGAGGGTGTTGGTAGTTCTTTTTGTCCCGACTACTCGGATTGGTTTGGGATTGGTGCTACTGATTCTCATTCAAGAAATGCAGACCGATCTGCTGTTTCAAAGTTTTTGCAAACCAATCCTGCAGACTATTCAACTAAAAAGTTGCAGGAAGTTGTCCGGTTGATGAGGGAAAAACGCTTCCCCGCTGCATTCAAATGTTATCATAACTTCCACAAAGTTGATGACATATCAAGTGACAATCTTTTCTACAAAATGGTCATTCATGTACACAGTGACTCAGCTTTCAGGAGATACCAGAAAGAAATGAGGCATAAACCTGGATTATGGCCACTATATCGTGGATTCTTTGTTGATATCAATTTATTCAAGGCAAACAAGGAGAGAACCACTGAAATTTCAAAGAATAATAGTACAAGTGAAAATGGTAGTGATAGCTCTGAGAAAGAAGAATTAGCTGATGAAGATGCAAACTTAATGGTCAAATTGAAATTTCTTACGTATAAGTTGCGAACATTTCTCATTCGAAATGGCTTGTCAATTCTGTTTAAAGAAGGTCCAGGTGCTTACAAGGCTTATTACCTAAGACAAATGAAAATATGGGGAACCTCCCCAGGAAAGCAGAGAGAACTTAGCAAGATGCTTGATGAATGGGCTGTCTTTATAAGAAGGAAGTGTGGAAATAAGCAACTATCATCATCAACTTATCTTAGTGAAGCTGAACCTTTCCTTGAACAATTCGGAAGACGAAGTCCTCTGAACCAGGCTCTAATAGGCTCTGCGGGTAATTTAGTTAGGACTGAAGATTTCTTGGCCATTGTTGAGGAAGGCCAGGACGAAGAAGGTGATCTTGCAGCAGAGCGGGAGTCAGTGTCACCTGGGCCTAGTATCCCAGTTCAAGACACGGTCCCAAAAGCTGATGGGCTGATTGTATTCTTTCCTGGAATACCTGGTTGTGCTAAGTCTGCCCTTTGCAAAGAATTGCTAAAGGCTAAAGAAGGATTAGGAGATGAGCGGCCAATGCATAGTCTCATGGGTGATATGATAAAAGGAAAATATTGGCAGAAAGTGGCTGAAGAACGCAGAAGGAAACCAAAGTCTATAATCCTTGCTGACAAGAATGCCCCAAATGAAGAAGTTTGGAGATTGATAGAAGACATGTGTCGCAGAACCAGGGCATCTGCTGTGCCCATTGTGCCGGATTCCGAAGGTTGGGTTTGTGGTTAA 2562 0.4375 MSAPQRLLCSLSSRTFLLLPFSHPYRTLASPPSPFSLIPMPRNQRRGQQWKEKPKREGELSAAAGGGATTSGSAETVTNGLAGLRIAESGAAKTSVGAGGQDRKVIWKPKSYGTASGVATAEAEMAGKGAADAAAAAGAEAVVASPKTSGSPSLSKLFSGNLLEKFTVDNNTYSQAQIRATFYPKFENEKSDQEIRIRMIEMVSKGLATLEVSLKHSGSLFMYAGHEGGAYAKNSFGNIYTAVGVFVLGRMFREAWGAAASKKQAEFNDFLERNHMCISMELVTAVLGDHGQRPREDYAVVTAVTELGNGKPRFYSTPEIIAFCRKWRLPTNHVWLFSTRKSASSFFAAYDALCEEGTATPVCKALDEIADISVPGSKDHIKAQGEILEGLVARLVSHDSPNHMKKILKEYPFPPADGDALDLGPSLREICAANRSDEKQQIKALLEGVGSSFCPDYSDWFGIGATDSHSRNADRSAVSKFLQTNPADYSTKKLQEVVRLMREKRFPAAFKCYHNFHKVDDISSDNLFYKMVIHVHSDSAFRRYQKEMRHKPGLWPLYRGFFVDINLFKANKERTTEISKNNSTSENGSDSSEKEELADEDANLMVKLKFLTYKLRTFLIRNGLSILFKEGPGAYKAYYLRQMKIWGTSPGKQRELSKMLDEWAVFIRRKCGNKQLSSSTYLSEAEPFLEQFGRRSPLNQALIGSAGNLVRTEDFLAIVEEGQDEEGDLAAERESVSPGPSIPVQDTVPKADGLIVFFPGIPGCAKSALCKELLKAKEGLGDERPMHSLMGDMIKGKYWQKVAEERRRKPKSIILADKNAPNEEVWRLIEDMCRRTRASAVPIVPDSEGWVCG* 854
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0340 853 PANTHER TRNA LIGASE 1 103 849 IPR038837 GO:0003972|GO:0006388
Amo13g0340 853 PANTHER TRNA LIGASE 1 103 849 - -
Amo13g0340 853 MobiDBLite consensus disorder prediction 577 596 - -
Amo13g0340 853 MobiDBLite consensus disorder prediction 31 75 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0340 Amo-Chr13 4589603 4598856 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0340 - - aip:107629182 1610.89
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0340 13 4589603 4598856 Amo13g0340 13 4589603 4598856 ECH