Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0339 ATGGCCGAGACATCCTCGGAGGAGGAGTTGAGTGTCGTGAACGACAACAACCATAAAAGTACAAATAATATCCCAATTGAGATCGTGAGTGATGAAGAAATGGCTCTCATTGAAGCTGCTTTTGCTTTAGCTTCTTCCTCTTCTGCTCGCTCTCTTTCTCTTTCTGCTTCCATTCGATCTTCTTCTTCTTCACCTTCTCCTCCTTCTCCCCTTCTTCACACCAACGCTCTTTCCATCAAATCAATCACTCTTCTCGCCAAGCGAAGGTTATCAACTGAAACTAGCAATGGCAATGGCAATGTTAACCACCCTGATATTGAAGACCTCTTGCCCAAGAAAACAAGGCTCCATGATTCATTTCTCCACCGATATAGAAGGAGCCGAGGCTTGTCCGTCACTGATCTCACTGCCGCGGAATGGTGCGAGAAACAGAAGGAATTCTCTCTTACCCGCGGTGGCCGGAGGACCACCAAGGCAATGAGAGCTGGTATTGCTAGACATGTGGAGCTTGAAGAAGAGGTTATGAAACGGGTGGCGGTGAAGATCGCCACAAAAGAAGACGGTTGGGCCCTGAAGTTTCTTAATTTTATTCATGGTGTGAATCAATTATTGTTTACAGGGTTAACTCGCGAACTGCCAATGTAA 645 0.462 MAETSSEEELSVVNDNNHKSTNNIPIEIVSDEEMALIEAAFALASSSSARSLSLSASIRSSSSSPSPPSPLLHTNALSIKSITLLAKRRLSTETSNGNGNVNHPDIEDLLPKKTRLHDSFLHRYRRSRGLSVTDLTAAEWCEKQKEFSLTRGGRRTTKAMRAGIARHVELEEEVMKRVAVKIATKEDGWALKFLNFIHGVNQLLFTGLTRELPM* 215
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0339 214 Pfam Exonuclease V - a 5' deoxyribonuclease 120 213 IPR019190 GO:0045145
Amo13g0339 214 MobiDBLite consensus disorder prediction 1 22 - -
Amo13g0339 214 PANTHER EXONUCLEASE V 14 213 IPR019190 GO:0045145
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0339 Amo-Chr13 4583445 4585133 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0339 K17815 - gmx:100792136 176.792
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0339 13 4583445 4585133 Amo13g0339 13 4583445 4585133 ECH