Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0330 ATGATGATCAAAAACCAATCTCTATTATTCTTCACAATAATACTACTAATTTCCACAACCACTATAGCACAATTATCACCAGCTATATCCCCAGTAGTTCAACCAAACCCTAAACCAACAACAACACCAGCAGCATCACCAAAACCATTGGTACCTTCATTACCAAGCAACTCACCAAGTGAGAACATTCCAGACACACCCACTGTTGACGTCATCGCCATTCTGAGGCAAGCGAAGTCATTCAACACACTCATCAGACTCATGAAGATCACCCAATTGATCAACCAACTCAACTCTCAGCTCATCACTTCCAAGTCCGGCGGCCTCACCATCCTCGCCCCCGACGACGCCGCCTTCTCCCAGCTCAAACCCGGCTTCCTCAACTCTCTTTCCGATGGACAGAAGCTTGAACTCGTGCAGTTCCACGTCATCTCCGACTACGTCTCGAGCTCCAACTTCGACACACTCACAAACCCGGTCAGGACACTGGCCGGCGCTAAACCGGGAAAGGTGGAACTCAATGTGATAAGCTATGGCGGGAGTGTTAACATCTCAACCGGAGCGGTTAACACTACAATTGATGGAATCATTTACACTGATAAGCATCTTGCTATCTATAAGGTAGGGAAGGTGCTTCTTCCTTTGGATTTCTTTGCGGTTGCTAAGACTCCTGCAAAGGCTCCATCTCTGGCTCCAGAACCTTCTGATTCCGCAAAGGCTCCTAAAGCTGATAAGGATGACACAGGAACATCCTCGGATTCATCTTCGTCGCAGGTTAATCCCACTGAACAGAGCTCCGCCGGTGCTGTGAAGATAAATGTGGTTGCACTTGGTCTTGCATTCACGGTGGCCGCTGCTGCAACCATGCACGCTTGA 876 0.4852 MMIKNQSLLFFTIILLISTTTIAQLSPAISPVVQPNPKPTTTPAASPKPLVPSLPSNSPSENIPDTPTVDVIAILRQAKSFNTLIRLMKITQLINQLNSQLITSKSGGLTILAPDDAAFSQLKPGFLNSLSDGQKLELVQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGAVNTTIDGIIYTDKHLAIYKVGKVLLPLDFFAVAKTPAKAPSLAPEPSDSAKAPKADKDDTGTSSDSSSSQVNPTEQSSAGAVKINVVALGLAFTVAAAATMHA* 292
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0330 291 MobiDBLite consensus disorder prediction 32 54 - -
Amo13g0330 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 281 - -
Amo13g0330 291 SMART fasc_3 110 215 IPR000782 -
Amo13g0330 291 MobiDBLite consensus disorder prediction 30 63 - -
Amo13g0330 291 Pfam Fasciclin domain 80 214 IPR000782 -
Amo13g0330 291 MobiDBLite consensus disorder prediction 250 266 - -
Amo13g0330 291 MobiDBLite consensus disorder prediction 227 266 - -
Amo13g0330 291 Gene3D FAS1 domain 54 214 IPR036378 -
Amo13g0330 291 ProSiteProfiles FAS1/BIgH3 domain profile. 68 197 IPR000782 -
Amo13g0330 291 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 8 281 IPR045003 -
Amo13g0330 291 SUPERFAMILY FAS1 domain 63 215 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0330 Amo-Chr13 4431498 4432373 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0330 - - gmx:100819833 341.658