Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0329 ATGATGATCAAAAACCAATCTCTATTATTCTTCACAATAACACTGCTAATTTCCACAACCACTATAGCACAATTATCACCATCTATATCCCCAGTAGTTCAACCAAACCCTAAACCAACAACAACACCAGCAGCATCACCAAAACCATTGGTACCTTCATTACCAAGCAACTCACCAAGTGAGAACATTCCAGACACACCCACTGTTGATGTCATCGCCATTCTGAGGCAAGCAAAGTCATTCAACACACTCATCAGACTCATGAAGATCACCCAATTGATCAACCAACTCAACTCTCAGCTCATCACTTCCAAGTCCGGCGGCCTCACCATCCTTGCCCCCGACGACGCCGCCTTCTCCCAACTCAAACCCGGCTTCCTCAACTCTCTTTCCGATGGACAGAAGCTTGAACTCGTGCAGTTCCACGTCATCTCCGACTACGTTTCGAGTTCCAACTTTGACACACTCACAAACCCGGTCAGGACACTGGCCGGAGCTAAACCGGGAAAGGTGGAACTGAATGTCATAAGCTATGGCGGCAGTGTTAACATCTCAACCGGAGCGGTTAACACTACAATTAATGGAATCATTTACACTGATAAGCATCTTGCTATCTATAAGGTTGGTAAGGTGCTCCTTCCTTTAGATTTCTTTGCGGTTGCTAAGACTCCTGCAAAGGCTCCATCTCTGGCTCCAGAACCTTCTGGTTCCGCAAAGGCTCCTAAAGCTGATAGGTCATTGTCCCCAGATTCCTCTACGGAATCATCATCTCAGGTTAATCCCACTGATCAAAACTCTGGGACAATGAAAATCAGTGGATGTGGACTTGTTCTTGGTGCAGTTCTCGTGACTATATTTTCATCATAA 867 0.4579 MMIKNQSLLFFTITLLISTTTIAQLSPSISPVVQPNPKPTTTPAASPKPLVPSLPSNSPSENIPDTPTVDVIAILRQAKSFNTLIRLMKITQLINQLNSQLITSKSGGLTILAPDDAAFSQLKPGFLNSLSDGQKLELVQFHVISDYVSSSNFDTLTNPVRTLAGAKPGKVELNVISYGGSVNISTGAVNTTINGIIYTDKHLAIYKVGKVLLPLDFFAVAKTPAKAPSLAPEPSGSAKAPKADRSLSPDSSTESSSQVNPTDQNSGTMKISGCGLVLGAVLVTIFSS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0329 288 MobiDBLite consensus disorder prediction 29 63 - -
Amo13g0329 288 ProSiteProfiles FAS1/BIgH3 domain profile. 68 212 IPR000782 -
Amo13g0329 288 MobiDBLite consensus disorder prediction 32 54 - -
Amo13g0329 288 SUPERFAMILY FAS1 domain 63 215 IPR036378 -
Amo13g0329 288 MobiDBLite consensus disorder prediction 246 267 - -
Amo13g0329 288 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 274 IPR045003 -
Amo13g0329 288 MobiDBLite consensus disorder prediction 227 267 - -
Amo13g0329 288 Pfam Fasciclin domain 80 214 IPR000782 -
Amo13g0329 288 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 7 274 - -
Amo13g0329 288 SMART fasc_3 110 215 IPR000782 -
Amo13g0329 288 Gene3D FAS1 domain 54 214 IPR036378 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0329 Amo-Chr13 4428145 4429530 Dispersed/Proximal
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0329 - - gmx:100790242 362.459