Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0327 ATGAAGAAGCAGCAGGTAACAGGATTGTACCTTGTCTTGCTAGTGTTGTGCTGCACCATCATTCAGGCATTTTCACAAACACCTGCGGCGTCCCCAAAACCAGCACCAAAAGCAGTAGCATCACCACCAAAGGCAACAACAAAAAAAGCACCGTCACCAAAGCCATTGGTGCCAACACTGCCGCAGTCACCAGACTCATCAGATGCAGCACCAGACGACATCACAAAGATTCTGAAGAAGGCGAAGATCTTCAACGTCCTAATCCGTCTGATGAAAACAACAGAGATAATGAACAACATCAACTCGCAGCTCATAACCGCCAAGACCGGAGGCATAACGATCCTGGCGCCGGACGACGACGCCTTCTCCAACCTCAAGGCCGGATTCCTGAACTCATTGGACGAAAAACAGAAGATAGAGCTGGTGCAGTTCCACATACTGCCGGAGTTTGTGGCCAGCAACAACTTCGACTCTTTGGCGAATCCGGTGCAGACAGTGGCGGGAAAAGATCCGGAGAGGCTGCCGCTGAACGTGAATGCGTTGGGGAACAGTGTGAACATATCAACGGGAGTAGTGAATGCGTCGGTGGTGGGAGTTGTGTACTCCGATAACAAACTCGCCATATACAAAGTGGATAAGGTGCTTCTTCCTTTGGATTTCTTTCAGAAAGCTAAGCCTCCTGCTTTGGCTCCCACCGCTCTCGCAAAGGCACCTAAGTCAGCTAAAGAGAACACCGCCGCCGACGATCAAGACGGTGACGCCACTCCCGCCGATCAGAAAAAATCTGCGGCTGTGATTATTGGAAAACCATTGGTGTCAGTTGCGATAGCTTCTCTCGTAGCAGTGCCAATGATGATGTGGAGCTGA 867 0.5063 MKKQQVTGLYLVLLVLCCTIIQAFSQTPAASPKPAPKAVASPPKATTKKAPSPKPLVPTLPQSPDSSDAAPDDITKILKKAKIFNVLIRLMKTTEIMNNINSQLITAKTGGITILAPDDDAFSNLKAGFLNSLDEKQKIELVQFHILPEFVASNNFDSLANPVQTVAGKDPERLPLNVNALGNSVNISTGVVNASVVGVVYSDNKLAIYKVDKVLLPLDFFQKAKPPALAPTALAKAPKSAKENTAADDQDGDATPADQKKSAAVIIGKPLVSVAIASLVAVPMMMWS* 289
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0327 288 PANTHER FASCICLIN DOMAIN PROTEIN 9 286 - -
Amo13g0327 288 MobiDBLite consensus disorder prediction 28 71 - -
Amo13g0327 288 Pfam Fasciclin domain 84 217 IPR000782 -
Amo13g0327 288 SUPERFAMILY FAS1 domain 57 218 IPR036378 -
Amo13g0327 288 MobiDBLite consensus disorder prediction 242 256 - -
Amo13g0327 288 PANTHER FASCICLIN-LIKE ARABINOGALACTAN PROTEIN 9 286 IPR045003 -
Amo13g0327 288 MobiDBLite consensus disorder prediction 233 257 - -
Amo13g0327 288 Gene3D FAS1 domain 58 217 IPR036378 -
Amo13g0327 288 ProSiteProfiles FAS1/BIgH3 domain profile. 71 215 IPR000782 -
Amo13g0327 288 SMART fasc_3 113 218 IPR000782 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0327 Amo-Chr13 4415338 4416300 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0327 - - gmx:102665444 323.168