Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0322 ATGACAAAGAAATTACGGTCTGATTCTTCCATACAAGAGGATGATGAGAAAGTGAGTAGCTTTGTGAGGATGGATTCAAGGGAAGGAGTGAATGATGGTTTTTCTAGGAATGGACCAAGTGATTCGCTTCTCCCTGGTCTTATTGATGATGTTGCGCTTAATTGCCTTGCTTGGGTTTGTAGATCTGATTATACTTCGCTATCATGCATAAATAAGAGGTACAACTTGCTGATTAAGAGTGGCTATTTATCTGAGTTGAGGAAGAAATTGGGAATTGTGGAGTTGGAGCATTTGGTTTATTTAGTTTGCGATCCGAGAGGGTGGGAGGCATTTGATCCTAAGAGAAACAGGTGGGTAGTGCTACCTAGGATACCTTGCGACGAGTGTTTTAACCATGCAGACAAGGAGTCCTTGGCTGTGGGCAGTGAGCTGTTGGTTTTCGGCCGTGAATTGATGGATTTTGCCATTTGGAAGTATAGCTTGGTTTGTCGTGAATGGGTGAAGTGTGAGGGCATGAACCGACCTCGCTGTTTGTTCGGATCTGGCAGTCTTGGTTCGATTGCTATCGTTGCTGGTGGAAGCGATAGGTATGGAACTGTTCTAGATTCTGCTGAGTTGTATGATTCTTCATCGGGTACATGGGAATTGTTACCACACATGCATACGCCGCGTAGATTGTGCTCTGGTTTCTTTATGGACGACAAATTCTATGTGATTGGTGGAATGTCGAGTCCTACTGCTTCATTGACTTGTGGGGAGGAGTATAATCTTAAGACAAGAAGTTGGCGGAAAATCGAGGGCATGTATCCGTATGTCAATGGGGCTGCTCAAGCACCTCCACTTGTGGCGGTCGTGGATAATCAATTATATGCAGTTGAGCATCTAACCAACATGGTGAAGAAATACGACAAGGACAATAATTCATGGAGTGAATTGGGAAGACTTCCAGTTCGGGCCGATTCTTCGAACGGATGGGGCCTGGCTTTCAAGGCTTGTGGAGAGAAACTTCTCGTCGTTGGCGGACAAAGAGGTCCAGAAGGCGAAGCTGTTGTACTGAATTCATGGTGTCCTAAAACAGGTGTCAGCAATGGAACCATCGATTGGCAGGTACTTGGCGTGAAGGAGCACGTTGGAGTGTTTGTGTACAATTGCGCCGTTATGGGTTGGTCCGGGGAGATGCGTCTAGATTGA 1191 0.4584 MTKKLRSDSSIQEDDEKVSSFVRMDSREGVNDGFSRNGPSDSLLPGLIDDVALNCLAWVCRSDYTSLSCINKRYNLLIKSGYLSELRKKLGIVELEHLVYLVCDPRGWEAFDPKRNRWVVLPRIPCDECFNHADKESLAVGSELLVFGRELMDFAIWKYSLVCREWVKCEGMNRPRCLFGSGSLGSIAIVAGGSDRYGTVLDSAELYDSSSGTWELLPHMHTPRRLCSGFFMDDKFYVIGGMSSPTASLTCGEEYNLKTRSWRKIEGMYPYVNGAAQAPPLVAVVDNQLYAVEHLTNMVKKYDKDNNSWSELGRLPVRADSSNGWGLAFKACGEKLLVVGGQRGPEGEAVVLNSWCPKTGVSNGTIDWQVLGVKEHVGVFVYNCAVMGWSGEMRLD* 397
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0322 396 Gene3D - 98 376 IPR015915 GO:0005515
Amo13g0322 396 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN-RELATED 35 388 - -
Amo13g0322 396 Pfam Kelch motif 175 220 IPR006652 GO:0005515
Amo13g0322 396 Pfam Kelch motif 223 268 IPR006652 GO:0005515
Amo13g0322 396 PANTHER GALACTOSE OXIDASE/KELCH REPEAT PROTEIN 35 388 - -
Amo13g0322 396 SUPERFAMILY Kelch motif 107 346 IPR015915 GO:0005515
Amo13g0322 396 SMART kelc_smart 187 234 IPR006652 GO:0005515
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0322 Amo-Chr13 4358407 4360795 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0322 - - gmx:100792139 729.939
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0322 13 4358407 4360795 Amo13g0322 13 4358407 4360795 ECH