Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0301 ATGTTCTGGAAGCTCGCTACTATCTCTGCCTCCTCTCCTGTGGAGGCAATACTAGACAAGGAGAATTTTACTTTGGAAGAGCTTCTGGATGAAGAAGAAATAATCCAAGAATGCAAGGCCTTAAACAGTCGTCTTATAAACTTTCTGAGAGATAGAGCTCAGGTTGAGCAATTGCTTCGCTACATTACTGAAGAACCACCAGAGGATGCTGAAAACAAACGGGTTTTCAAGTTTCCATTCATTGCCTGTGAGATCTTTACATGTGAAATTGATGTCATTTTGAAGACCTTGGTGGATGAAGAAGAGCTCATGGACTTATTATTCTCCTTTTTGGAACCTGATCGTCCTCATAGTACTTTACTGGCTGGGTACTTTAGTAAGGTTGTTGTTTGCCTAATGACTAGGAAGACAGTGCCTCTTATGAATTATGTTCAAGCTCATCAGCATGTTTTTCGCCAACTGGTTGATTTGATAGGAATTACATCCATTATGGAGGTTTTGGTTCGATTAGTAGGTTCTGATGACCATGCATATCCCAATTTCATAAATGTGGTGCAATGGTTGGCTGAAAGCAACCTGCTGGAGATGATTGTTGATAAATTAAGTCCATCTAGTCCTCCTGAAGTTCATGCCAATGTAGCTGAAACATTATGTACAATAACTAGAATTGCATCTTCTACTTTAGCAGTCAAACTTTCAAGTCCAAGTTTTGTCACAAAAATTTTGGATTATGCATTGGAAGATTCACAATCAAAGTCCAGCCTTATCTACTCACTCTCAGTGTGTATTTCTTTGTTGGATCCCAAAAGATCAGTTGTGTCATTTCCACTATTTCATTCGTTCAGAAGTCAAAACATGTATGAGCCGCCAATTCCTATAAACCCGGATACTATTGGCGCTATGCTCCCTAAACTTGGTGACTTGCTTGTGATTTTGAATGTGTCATCTGATCAGAAGGTATTGCCTACAACATATGGTGAATTGAGACCTCCACTTGGGAAGCATCGATTAAAGATTGTGGAGTTTATTGCTGTACTTCTGAAAACTGGAAATGATGTGGCAGAAAAAGAGCTGGTCAAATCAGGAACCATTCAACGAGTTATTAATCTTTTCTTTGAGTACCCATACAATAATGCATTACACCATCAAGTAGAAAGTACCATATTATCATGTTTGGAGAGCAAAACTGATGCTATTACTGATCATCTTCTTCGAGAGTGTGATTTAATTGGAAGGTTTCTACAAGCAGACAAACAACGTATTCTGTCTGCTGAAAGCAATCTGCCAACAGTACCTGCCGCAGGAAAACGAGCACCACGGGCAGGAAATATTGGACATATTACTAGAATTGTCAATAAGCTTGTTCACTTGGCACATAACCGAGGCCAACTGCTGACATTTCTTCAGCAAAACAGTGAGTGGAATGAGTGGCAAACTACAGCTCTTCAGGAGCGTAACATGGTTGAGAATGTTCACCGTTGGGCTTGTGGACGACCAACTGCATTGCAAGATAAGATGAGGGATAGTGATGATGATGACCTTCATGACAGAGACTATGACGTTGCAGCTCTAGCAAATAATTTGAGCGAGACTTTAAGATACAAAATATATGGAAATGATGATAATGAAGAGGAACGTGGAAATCTTGATCGGGATGATGAGGATGTTTACTTTGATGATGATTCTGCTGAAGTAGTCATATCATCCCTTAGACTAGGTGATGATCAAGGGAGTAATCTGTTTACAAACTCAAACTGGTTTGCTTTCCAAGATGATCAAATTGGCAATGCACCTGGGGCCACATCATCCTCAGAGATGATGGATAAGGTAAAACTGAATGAAGCTGCTAATGGTGGTAGCAACAGTAGTGACGATGAGGTAGTTGTTGGAGTAGATGAATTGACAGACAGCAAAAATACTAGTATTGCAGCCAACTCAAGGACAAACTTCTTTAGTGGTTTAGCTGGTAGCAATGCCATGAATGGGGATGTTTTAGACTTCGAAAGTGTGAAAGCAAGCGGTTCAAACGATATGGAATTCTTCAGGTTTGATGCACCTGAGAATGAAGACTTATTTGGAGACAGGCCTTTACCTGATTGGGTGGGATGGGGAGAACCTGCCTCAAGCACAAACCCCTTTGTGGATCATGACGAGTCGGATGGTTCTACTAAGCCTCAAGTAGGCAGCCCTAATGCAAGTTCTCCTACAAAAGGCGAATCAAGCCCATCAAATGGATCACCATCAAGTAGAGATTCTGGGGAGGGGGGTAGTCCAAAACCAGTCGTGGTACCCTCTCTATTTGAAGAGGATGTTGAATTTGTAGGTGTAGAATTAGAAGGTACTGAAAAGGCAATGGAACAGGCTCTTAAAGAAGGGATAGTTGGGGAAGCAGGACCTTTGAAAAGGAAGATAGTCCCAAAAGTGCCAGAGAAGGAAAGTTCTGAAGAAGGCAATCCTGGTATGAAGGAATTCAATGATGCAAATTACTGGAGGGTTGACCAAGAAGTTGCTGTTCTTGAGTGA 2523 0.411 MFWKLATISASSPVEAILDKENFTLEELLDEEEIIQECKALNSRLINFLRDRAQVEQLLRYITEEPPEDAENKRVFKFPFIACEIFTCEIDVILKTLVDEEELMDLLFSFLEPDRPHSTLLAGYFSKVVVCLMTRKTVPLMNYVQAHQHVFRQLVDLIGITSIMEVLVRLVGSDDHAYPNFINVVQWLAESNLLEMIVDKLSPSSPPEVHANVAETLCTITRIASSTLAVKLSSPSFVTKILDYALEDSQSKSSLIYSLSVCISLLDPKRSVVSFPLFHSFRSQNMYEPPIPINPDTIGAMLPKLGDLLVILNVSSDQKVLPTTYGELRPPLGKHRLKIVEFIAVLLKTGNDVAEKELVKSGTIQRVINLFFEYPYNNALHHQVESTILSCLESKTDAITDHLLRECDLIGRFLQADKQRILSAESNLPTVPAAGKRAPRAGNIGHITRIVNKLVHLAHNRGQLLTFLQQNSEWNEWQTTALQERNMVENVHRWACGRPTALQDKMRDSDDDDLHDRDYDVAALANNLSETLRYKIYGNDDNEEERGNLDRDDEDVYFDDDSAEVVISSLRLGDDQGSNLFTNSNWFAFQDDQIGNAPGATSSSEMMDKVKLNEAANGGSNSSDDEVVVGVDELTDSKNTSIAANSRTNFFSGLAGSNAMNGDVLDFESVKASGSNDMEFFRFDAPENEDLFGDRPLPDWVGWGEPASSTNPFVDHDESDGSTKPQVGSPNASSPTKGESSPSNGSPSSRDSGEGGSPKPVVVPSLFEEDVEFVGVELEGTEKAMEQALKEGIVGEAGPLKRKIVPKVPEKESSEEGNPGMKEFNDANYWRVDQEVAVLE* 841
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0301 840 MobiDBLite consensus disorder prediction 723 753 - -
Amo13g0301 840 PANTHER SERINE/THREONINE-PROTEIN PHOSPHATASE 6 REGULATORY SUBUNIT 2-LIKE ISOFORM X1 1 838 - -
Amo13g0301 840 Pfam SIT4 phosphatase-associated protein 131 355 IPR007587 GO:0019903|GO:0043666
Amo13g0301 840 Pfam SIT4 phosphatase-associated protein 357 491 IPR007587 GO:0019903|GO:0043666
Amo13g0301 840 MobiDBLite consensus disorder prediction 693 764 - -
Amo13g0301 840 MobiDBLite consensus disorder prediction 807 826 - -
Amo13g0301 840 PANTHER SIT4 YEAST -ASSOCIATING PROTEIN-RELATED 1 838 IPR007587 GO:0019903|GO:0043666
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0301 Amo-Chr13 4149765 4158728 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0301 K15501 - gmx:100790416 1339.32
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0301 13 4149765 4158728 Amo13g0301 13 4149765 4158728 ECH