Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0294 ATGGTGATCCAAGACTATGTAGGATCAAAGAACAACAAAGTGATGAAATCCCAAAGGAGTGGTGCACCAGCAAAGTTGGTGACAGCACTAACATGTCTCCAATTCTTCTTTGCAGTTTATGCAACATTCTTACTATATTACATGGGACCTTCCATTGATCTAAGAACATCAAAGCCAGATTTCACATGGGCCACAAGAATTGCAAACCAATGGAAGCAATACATGATCACACCCCATGTTGTTGGACACTACCAAGAAGCTGCTTCTTCTCTCATAAGAGAAGATAGTAATAATAATAATAACAATAATAATGTTCTTGTTCTTGTTCCTCCTCATCAAGAAGAACAACCTTTGAACCAATCACAAGTTTGTGAGTATGAGAAGATTGATTTCATGCAGAAGAAGTCCAATGATGTTCAAATGATGAAGCTGAAGAGGGAGCTGTATGATGAGGTTTTGGAGTTTCAAAGCAGAAGCATTGGAACTGAGACATTACCTCAGTTAATGGCAATGAAATCCAAGTGGGACATAAAGGGTAGTAGAAACCAAAAACCAAAGATCACAGTTTTGTTGAACCATTTCAAGAGAAAGACACTTTGTGCACAGATTGATTCATTGCTACAACAAACTCTCCCTTTTCACCATGCTTGGGTGCTATCATTTGGTAGCCCAAATGAACTTTCCTTGAAGAGAATTGTTGAAAGCTACAATGATTCAAGGATCAGCTTCATAAGCTCAAGCTATGATTTCAAGTACTATGGAAGGTTCCAAATGGCACTACAAACAGAATCTGATCTTGTATACATTGTTGATGATGACATGATTCCAGGGAAGAAAATGCTTGAGATTCTAGCACATGTTGCTGGGACTGAGAAGTACAAGAACTCAGTGTTGGGAAGTATTGGGAGGATTTTGCCATTTAGGCAGAAAGATTTTACATTTCCAAGTTATAGAAAGTTTAGGTCTAAAGAAGCAGGGTTGTATTTGCCTGATCCTGCTTATGATATCACTGTTGATAAGATTGTGCAGGTTGATTTTCTTTCTAGCTCTTGGTTTCTCTCTGCTCAACTTGTTAAGACCCTCTTCATTGAGACTCCTTTTACTTTCTCCACTGGTGAAGATCTGCATTTGAGCTATCAGCTTCAAAAGTACCAGAATGCAGGGTCATTTGTTGTCCCAGTTGACCCTAATGACAAGGAAACATGGGGTGACAGTGAACATAGGCTAGCCTATGTATCCGAAACCACAGTGATATTCAAGGACATAGTTCAAGTTAGAGATGATCAATGGTGGAAAGCACTTTCCACAGGCTATGTTACACAATGGGCAGCAATGCACCCTCAAAACATTGATGCCCTCTTCTACGCTCACACACTTGACCATGTTAAAGCACTTCAACCACTTCTTGACAAGTTCAGGTCTACAATGGGTAAAAAGACCTACATCGTGGTCTCGGGTGGAAAATTTTGCCCTTGCGAGGATGCTGCAAGGGCATTGAAGTGGCCATTGTTGGTGTGCAAGGAGAGGAGGTTCAAGATCTTTGACTTGGGAATAGAGGCCATTTCCGGGGTCTCGGATTCAGAGGTGCCGGTGATACAGGCAGTGTATTCTAGCATGAAAGGTTTGATCAAGATTCATAATCCTAGTGTTGTGATCACACTGGATGACATTGATCCTCATGTGAGGAAGGCTCTCAAGATGGCATCAGAGAGCACTTCCAATGCTACTACTTTAGTGTTGTTGCCCAGAGCTTCTGTCCCCAAAGTGCTTTGGATGCCTGATCTCCGTTCAACTGCATTGCCAAATTGGAACAAGATGAGACTTTCTATCAACATCATCACCCAAAATAGAGTAACTTCACTAACAAGGCTCCTCAAATCTCTAAGCAATGCATACTATCTTGGTGATGAAATTCCCATAACCTTCAACATGGATAGCAAGGTAGATGAGGCAACAATAAAGCTAGTGGGCTCATTTGAGTGGCCTCATGGGCCCAAAACTCTAAGAAGGAGGATCATCCAAGGTGGGCTCATTAGGGCAGTTAGTGAGAGTTGGTACCCATCCAATGATGATGACTTTGGGCTTTTACTTGAAGATGACATTGAAGTTTCCCCATACTACTACCTTTGGATCAAATATGCATTATTAGCATACCACTATGATCCACAAGTTTCTCTCCCTGAATTGTCCTCAATTTCACTCTACACACCAAGGCTTGTTGAGGTTGTTAAAGAAAGGCCCAAATGGAATGCCACTGAATTCTTCAAAAACATTCATCCAAACACACCTTACCTACACCAATTACCTTGTTCTTGGGGGGCAGTGTTCTTCCCTAAACATTGGAGAGAATTCTATGTTTACATGAACATGAGGTTCACTGAGGATGCTAAAACAAACCCGGTTCAAATCCCAAGGTCAAGAACAAATGGGTGGCAAGCATCATGGAAAAAATTCCTAATTGACATGATGTACCTTAGAGGGTATGTTAGTCTTTACCCTAATTTCCCTAACCAAGCTAGCTTCTCAACCAATCACATGGAGCCAGGTGCACACATTAGTGCTAAGGACAATGTTGTCAAACATAACAAACAAGACTTTGAGGTTCCATTAATGAGTCAAGATTTTAGAGAATTGCTACCTAGTTTGAAGATGCCACCAGCTTCAAGATTACCATCATTGAACCTATTCAATCAACCTGTTTCTTTAAAGGGTCTTAAAGCTGCTGGTGCTAAGTTGGGTCAAGATGTTCTAAGGTGTAACAATGTTTCTGAGGTTGTAGCTGTGGATCAAGATACTGGTCTACCACAACGCTGCTCCAAATTCTGA 2826 0.4108 MVIQDYVGSKNNKVMKSQRSGAPAKLVTALTCLQFFFAVYATFLLYYMGPSIDLRTSKPDFTWATRIANQWKQYMITPHVVGHYQEAASSLIREDSNNNNNNNNVLVLVPPHQEEQPLNQSQVCEYEKIDFMQKKSNDVQMMKLKRELYDEVLEFQSRSIGTETLPQLMAMKSKWDIKGSRNQKPKITVLLNHFKRKTLCAQIDSLLQQTLPFHHAWVLSFGSPNELSLKRIVESYNDSRISFISSSYDFKYYGRFQMALQTESDLVYIVDDDMIPGKKMLEILAHVAGTEKYKNSVLGSIGRILPFRQKDFTFPSYRKFRSKEAGLYLPDPAYDITVDKIVQVDFLSSSWFLSAQLVKTLFIETPFTFSTGEDLHLSYQLQKYQNAGSFVVPVDPNDKETWGDSEHRLAYVSETTVIFKDIVQVRDDQWWKALSTGYVTQWAAMHPQNIDALFYAHTLDHVKALQPLLDKFRSTMGKKTYIVVSGGKFCPCEDAARALKWPLLVCKERRFKIFDLGIEAISGVSDSEVPVIQAVYSSMKGLIKIHNPSVVITLDDIDPHVRKALKMASESTSNATTLVLLPRASVPKVLWMPDLRSTALPNWNKMRLSINIITQNRVTSLTRLLKSLSNAYYLGDEIPITFNMDSKVDEATIKLVGSFEWPHGPKTLRRRIIQGGLIRAVSESWYPSNDDDFGLLLEDDIEVSPYYYLWIKYALLAYHYDPQVSLPELSSISLYTPRLVEVVKERPKWNATEFFKNIHPNTPYLHQLPCSWGAVFFPKHWREFYVYMNMRFTEDAKTNPVQIPRSRTNGWQASWKKFLIDMMYLRGYVSLYPNFPNQASFSTNHMEPGAHISAKDNVVKHNKQDFEVPLMSQDFRELLPSLKMPPASRLPSLNLFNQPVSLKGLKAAGAKLGQDVLRCNNVSEVVAVDQDTGLPQRCSKF* 942
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0294 941 PANTHER OSJNBA0004B13.7 PROTEIN 18 941 - -
Amo13g0294 941 SUPERFAMILY Nucleotide-diphospho-sugar transferases 605 798 IPR029044 -
Amo13g0294 941 CDD Glyco_tranf_GTA_type 197 288 - -
Amo13g0294 941 PANTHER GLYCOSYLTRANSFERASE FAMILY PROTEIN 2 18 941 - -
Amo13g0294 941 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 168 395 IPR029044 -
Amo13g0294 941 Gene3D Spore Coat Polysaccharide Biosynthesis Protein SpsA; Chain A 608 856 IPR029044 -
Amo13g0294 941 SUPERFAMILY Nucleotide-diphospho-sugar transferases 184 384 IPR029044 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0294 Amo-Chr13 4071816 4076465 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0294 - - gmx:100790938 1634
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0294 13 4071816 4076465 Amo13g0294 13 4071816 4076465 ECH