Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0290 ATGGCCGGCAAAGGCGGAAGCGCTCCGGCGACGTACTCGCCGTCTCCGACCGTTCAGAAAAAGAAAACTTCCATTTTCCAAGAAGACTGGGTCCGACCTGATGGCCGTGGCTTCCACCAGTGCAGGCCTGCTTTTTTCAGGACTGGTGCTGTGAATGCTGCATCAGGATCAGCCTATGCGGAGTTTGGAAACACCAAGATCATTGTATCTGTATTCGGGCCTAGGGAGAGCAAGAAGGCAATGATGTACAGTGATATAGGGCGTTTAAATTGCAATGTTAGCTATACAACGTTTGCAAGTCCAGTTCGTGGACAGGGTTCAGACCACAAAGAATACACTGCAATGCTTCATAAAGCTTTGGAGGGTGCAATAATATTGGAATCTTTCCCCAAGACAACTGTGGATGTTTTTGCATTGGTGCTGGAATCTGGCGGCAGTGATCTCCCAGTTGTCATATCATGTGCTAGCCTTGCCCTGGCAGATGCTGGAATAATGATGTATGACCTTGTTGCATCAGTTTCTGTGTCCTGTCTCAGTAAGAATCTTGTCATTGATCCTATTTTTGAGGAGGAAAACTCCCAAGATGGAAGCTTGATGATTACGTGCATGCCTTCTCGCTATGAAATTACTCAACTTACATTTACTGGGGAATGGTCCACCCCAAAGATTGACGAGGGAATGCAGCTTTGCCTTGACGCTTGTGCAAAGCTTGCAAAGATTATGAGGTCATGTTTGAAAGAAGCTGCTTCTGATTCTCAAGAATAG 765 0.4641 MAGKGGSAPATYSPSPTVQKKKTSIFQEDWVRPDGRGFHQCRPAFFRTGAVNAASGSAYAEFGNTKIIVSVFGPRESKKAMMYSDIGRLNCNVSYTTFASPVRGQGSDHKEYTAMLHKALEGAIILESFPKTTVDVFALVLESGGSDLPVVISCASLALADAGIMMYDLVASVSVSCLSKNLVIDPIFEEENSQDGSLMITCMPSRYEITQLTFTGEWSTPKIDEGMQLCLDACAKLAKIMRSCLKEAASDSQE* 255
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0290 254 Gene3D - 18 253 IPR027408 -
Amo13g0290 254 SUPERFAMILY Ribosomal protein S5 domain 2-like 26 195 IPR020568 -
Amo13g0290 254 MobiDBLite consensus disorder prediction 1 21 - -
Amo13g0290 254 Pfam 3' exoribonuclease family, domain 1 40 164 IPR001247 -
Amo13g0290 254 PANTHER EXOSOME COMPLEX COMPONENT MTR3 11 249 - -
Amo13g0290 254 SUPERFAMILY Ribonuclease PH domain 2-like 166 251 IPR036345 -
Amo13g0290 254 CDD RNase_PH_MTR3 41 247 - -
Amo13g0290 254 PANTHER EXOSOME COMPLEX COMPONENT 11 249 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0290 Amo-Chr13 4021715 4024283 Dispersed/Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0290 K12587 - gmx:100816271 464.536
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0290 13 4021715 4024283 Amo13g0290 13 4021715 4024283 ECH