Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0282 ATGGAAAAGTTTTCATCGAAGTTTTTCATTTGCATTTTATTTGCAGCACTTCTTTTGCTATATTCCCCAGCTAGATCGCAAGAATTATTTGAGGATGAGGACGAGTATAATTATGATGAAAATAGTGACAGAGGACCATCTCATTGGGGAAACATAAAACCAGAATGGAGAACATGCAAAACTGGAAGAATGCAATCACCAATTGATTTGAATAAGAAGAGGCTTCAATTGGCTAAACTAGGACCCCTTAACTTGAACTACAACCCCTCCAATGCTACCCTTAAGAAAAATATTTATGAAATTGAGTTGCTGTTTCTTGATCCAACAAGCTCTCTAACAATCAATGGAACTCGTTATATACTTCAAAATTTACATTGGCACATTCCATCTGAGCACACGATTAATGGACGAAGACTGGATCTAGAGGTACACCTGGTGCATGTGCATCAAACTCCAACAACTAATCTAACAGCAGTGATTGGAATACTTTTCAAGACTGGATCAAGAACAGACCCACTATTGGTTAGAAAAGTTAGAGGGGATCAAATCAAACTGCTTCAGAATGCTGTTGCTGATGATTCGAACGGCAATGCGAGACCAATACAACCAACAAACAATCGCAAAGTGCAACTCAATAAAGAGTATAATTAA 651 0.3763 MEKFSSKFFICILFAALLLLYSPARSQELFEDEDEYNYDENSDRGPSHWGNIKPEWRTCKTGRMQSPIDLNKKRLQLAKLGPLNLNYNPSNATLKKNIYEIELLFLDPTSSLTINGTRYILQNLHWHIPSEHTINGRRLDLEVHLVHVHQTPTTNLTAVIGILFKTGSRTDPLLVRKVRGDQIKLLQNAVADDSNGNARPIQPTNNRKVQLNKEYN* 217
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0282 216 SMART Carb_anhydrase_2a 38 213 IPR001148 -
Amo13g0282 216 CDD alpha_CA_prokaryotic_like 45 211 IPR041891 -
Amo13g0282 216 ProSiteProfiles Alpha-carbonic anhydrases profile. 34 216 IPR001148 -
Amo13g0282 216 SUPERFAMILY Carbonic anhydrase 35 209 IPR036398 -
Amo13g0282 216 Pfam Eukaryotic-type carbonic anhydrase 45 170 IPR001148 -
Amo13g0282 216 PANTHER CARBONIC ANHYDRASE 175 213 IPR023561 GO:0004089|GO:0008270
Amo13g0282 216 Gene3D Alpha carbonic anhydrase 32 176 IPR036398 -
Amo13g0282 216 PANTHER ALPHA CARBONIC ANHYDRASE 3 175 213 - -
Amo13g0282 216 MobiDBLite consensus disorder prediction 194 216 - -
Amo13g0282 216 PANTHER ALPHA CARBONIC ANHYDRASE 3 10 175 - -
Amo13g0282 216 PANTHER CARBONIC ANHYDRASE 10 175 IPR023561 GO:0004089|GO:0008270
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0282 Amo-Chr13 3951432 3955413 Dispersed/Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0282 K01674 - gmx:100811978 177.178
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0282 13 3951432 3955413 Amo13g0282 13 3951432 3955413 ECH