Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0279 ATGTCCCACCTTCACCAGCATCCACAACACCCTCTTCTTCTTCAACAACACTACCACCACCCTGAAAGCTCCCTCTCATCTTTTCATGCAATAAACAAAGCCAAGAAGAAGAAGAAGAATGGTATTAGAAGAAGTGATGGGACTTTCTTGGGTCACAAGTTTGTGTCATCATCAATAACCTCCTTTTCTAACCATAATAATAAAAATAATAGTAATGAAGGTGATGAAGGAAGCCCTCCAACAACAACACAACAGTGTTGTTTTAATGTCTATTCTTCAAGGCGTTGGGGTGCTAATACTAACATTGTTGGGTGTAGTGAGAGGAAGAAGAAAATTTCTGGGCAGCAAAAGAAAGAGGAACTTGAAAGAGAGGTCTCTATGCTTCAAAAGTTATTGGACCAAGAAGAGAAGGTTCATGAGATTTTAGAGATGGTGCATAATAGACCAAATAATGTTTCAACCTTATCATCAATTCCCAATTTTCTTCCTCCCAAGATGAAAGAACTTTTAGCAGAGTTAGTAATGGTTGAGGGAGAGATATCAAGACTTGAAATCCAAATAAATCATCTTCAAACAAGTTTGAAACATGAACAAGAGATCACAAAGGAAACAAAATCAAAATCATGGAATTTGAGCAATAATAATAATTCTGGTTCTTATAATGTGAACAATCATCATCATCACAATTTCCCTACTTCTGCACCAATTCCAATTCCAATTCCAAGTCCTATTCATCATAGAAGCAGTGTTCATGAAAGAATGGCATATGAGACCAAAGCACTGCATTTCATAAGCAAAGCTATAAAGGGTGATTACTATGCTCTTAATAGTAATAATAATGAGCTTAGTAGTAGTCTTAATGAGAAAACAGGGTTCATGATGATGATGAAGAATTCAGTTGAACAGAAAGAAAACAAGTTTCAAGAGGATGTGAAGTTTCATCAAGAAAGAGTTGTTGGTAGGAAAATTAATAATGGGATGGTGAAAGCTCCTTCACCTATGAGAGACCCTCGCCATCCATCACCTAAGCTTAGGGAACGTAATCCAGAGATGTACCTAGATCTTCCAACAAGATCACTGCTTGATCCACTTCTTTCAGAAGAAAATGATCTAAAATGGCAACCCAACAAGCTATCAGAGAGCATAATGAAGTGTTTGAATTTCATATATGTGAGGCTTCTAAGAACATCAAGAGCAATGGAATTGGAGAAATCAGGTCCAATTTTAAGGTCTATGCACTCTTCACTAAGCTCAAGAAGCTTTAGGGTGGACACTACATCAAACACAAAATCAAACTTAATGCTTCAAAGGGAAGCAAGGCAACAAGACCCTTATGCTATCTTTGATACTGAAGAGTCCATTCCAAGGGACATTGGTCCTTACAAGAACTTGGGATTTATACAATATGGAGTTCCATCCACACCAGAAAAGCTACTTGCATTGATGAACAAGGCAACTCTCAATATAGGAGGCAACATAATAAATGCTCAAGAAATAGAGCATTTCATTTTGAGGAAAAGAGCTACTTCTAATATCAAAGAGGTGCAGAGGAAGGGTGAGCGGGAAGATAAAGAGTCAAAAATTGGTGAACTATATGAAGTTGAATCCATAGATCCTAATGTCACATTTGCTCTCTGTTGTGGAACTCGTTCTTCTCCAGCTGTGAGGATATACACATCTGAAGGAGTTACATCTGAATTGGAGAAATCAAAACTAGATTATCTTCAAGCTTCAATTTTGGCAACAAGCACAAAAAGGATTGGATTCCCAGAACTACTTCTCAGAAACATGCATGATTTTGCATCAGACATAGATTCATTGGTGGATTGGGTGTGTAACCAGTTACCTACTTCTGGTACTTTAAGGAAATCAATGGTGGATTGCTTCAGAACCAATAATAATAATAATAATGTTAAGGCTTCTACAATTGTTGACAAGATTCCCTATGACTATGAATTCCAATATCTGTTGACAATATAA 1980 0.3697 MSHLHQHPQHPLLLQQHYHHPESSLSSFHAINKAKKKKKNGIRRSDGTFLGHKFVSSSITSFSNHNNKNNSNEGDEGSPPTTTQQCCFNVYSSRRWGANTNIVGCSERKKKISGQQKKEELEREVSMLQKLLDQEEKVHEILEMVHNRPNNVSTLSSIPNFLPPKMKELLAELVMVEGEISRLEIQINHLQTSLKHEQEITKETKSKSWNLSNNNNSGSYNVNNHHHHNFPTSAPIPIPIPSPIHHRSSVHERMAYETKALHFISKAIKGDYYALNSNNNELSSSLNEKTGFMMMMKNSVEQKENKFQEDVKFHQERVVGRKINNGMVKAPSPMRDPRHPSPKLRERNPEMYLDLPTRSLLDPLLSEENDLKWQPNKLSESIMKCLNFIYVRLLRTSRAMELEKSGPILRSMHSSLSSRSFRVDTTSNTKSNLMLQREARQQDPYAIFDTEESIPRDIGPYKNLGFIQYGVPSTPEKLLALMNKATLNIGGNIINAQEIEHFILRKRATSNIKEVQRKGEREDKESKIGELYEVESIDPNVTFALCCGTRSSPAVRIYTSEGVTSELEKSKLDYLQASILATSTKRIGFPELLLRNMHDFASDIDSLVDWVCNQLPTSGTLRKSMVDCFRTNNNNNNVKASTIVDKIPYDYEFQYLLTI* 660
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0279 659 Pfam Protein of unknown function, DUF547 466 575 IPR006869 -
Amo13g0279 659 MobiDBLite consensus disorder prediction 326 346 - -
Amo13g0279 659 Coils Coil 111 138 - -
Amo13g0279 659 Coils Coil 166 200 - -
Amo13g0279 659 Pfam Leucine-zipper of ternary complex factor MIP1 114 197 IPR025757 -
Amo13g0279 659 PANTHER TRANSPORTER, PUTATIVE-RELATED 107 464 - -
Amo13g0279 659 Coils Coil 297 317 - -
Amo13g0279 659 MobiDBLite consensus disorder prediction 61 82 - -
Amo13g0279 659 PANTHER EXPRESSED PROTEIN 465 659 - -
Amo13g0279 659 PANTHER EXPRESSED PROTEIN 107 464 - -
Amo13g0279 659 PANTHER TRANSPORTER, PUTATIVE-RELATED 465 659 - -
Amo13g0279 659 Coils Coil 505 525 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0279 Amo-Chr13 3844746 3852008 Transposed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0279 - - ahf:112736472 1066.22
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0279 13 3844746 3852008 Amo13g0279 13 3844746 3852008 ECH