Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0278 ATGATGAACAAGATAGAGGGATACGTAGAGATATTAGGGAAGGTTAACTTTGTTACAATTGTTGTTGTATTGACCTGCATTGTGGGGCCAGCGTCTTCTCAAACAGCCCCCGGCGGTGGCGCCGCGGCCGGCGGCGGCACCGGCCTCCCCAATGAAGCTGCAGTTCAGTTATTTGCACAGGAAATGTACAAAAGCATGGGTAGTTACACCAACGTCTTCAAGGATTCAATCAGGAAACACTTGGGATTTTGCATTGTGGATGCGTCTGTATTCTCATTCCTTCATTCATTCATTCATTTCTGTATGGACCGAGATTGGGATGGTGCCTTCAATTTCTCCAGTGATCTCTCTTTTCTCACCAACTGTGCCAAAAATTTACAAGGAGATATTACACAGCGCATGTGCATAGGTTCAGAGCTTGAAATGTATTCATCGCTGGTTAAAAGCAACAAAAGGTTTGTGAATCCGAATGTGAACTGCAATACGAGCACGTGGCTAAATGGGTGTGAGCCTGGATGGGCATGTAAGGCTAATGAGAAAGTAGAGCTTAACAGCACCCAGAAAGACATACCTGTTAGAAATTCAGATTGCCAACCTTGTTGTGAAGGTTTCTTTTGCCCTCCTGGTCTTACTTGCATGATACCTTATTGTCCACGTGGAACTCTCAATGCAACAAGTGGAGTATGTCAACCATATCGTTATCAGATACCTCCTGGAAAGTTAACCCATTCTTGTGGGGGAGCAGATATTTGGGCTGATATTAGAAGCAGTGCAGAGGTTTTCTGTGCTCCAGGAGCATTCTGTCCATCTAATATCATAAAAAATGATTGCAATAAGGGGTATTACTGCAGAACAGGTTCTACTGCTCAAGAGAGATGTTTCACTTTGGCAACATGTGAACCTAAATCAGAAAACCAGAATATTACTGCATATGGTGTCCTGGTCTTTGCTGGAGTGTGTTTCATGCTCATTATCATATATAACTGTTCTGATCAAGTTCTTGCAACTCGAGAAAGAAGACAAGCAAAATCAAGAGAAAGGGCTGCAGCACACGTGAGAGAAACACAAGCGCGAGAAAAATGGAAATCAGCAAAAGACATAGCCAAGAAGCACGCAGTAGGTCTGCAATCGAGTTTGTCGCGAACATTTTCACGCCAAAAGACTAACAAGGGATCCGGAACCTTACCACCTTCTGCCCCTGCAAAAGCAAAGAAAAAGGACAAGAGCAACCTCAGCAAGATAATAAGTGACATTGAGGAAGATCCTGATAGCCAAGAAGGTTTTAATATTCAGATAGGGGATAAGAATGTTAAGAAGCAAGCACCAAAGGGTAAGCAATTGCATACTCAGAGTCAAGTGTTCAAGTATGCATATAATCAGATTGAGAAAGAGAAGGCCTTACAGGAACAAATGAAGAACATGACCTTCTCTGGAGTTATCTCAATGGCTAATGAGATTGAGATAAGGAAAAGGCCTACCATTGAGGTTGCATTTAAAGATTTAACACTCACTTTGAAAGGAAAAAACAAACACCTATTAAGAAGTGTGACAGGTAAATTGTTTCCCGGCCGGGTTTCAGCAGTTATGGGACCATCTGGGGCCGGCAAGACAACATTTCTTTCTGCTTTGACCGGGAAAGCGGCTGGATGCACCACAACTGGTCAAGTTCTTGTAAATGGCCAGGAATCGCCAATTCGGTCGTACAAGAAAATCATTGGATTTGTGCCACAAGATGATATTGTTCATGGAAATTTGACAGTGGAGGAAAATCTGTGGTTCAGTGCCAGATGCAGGCTCGCGGCTGATCTACCAAAAGAGGAGAAAGTCTTAGTGGTTGAAAGAGTCATCGAGGCTCTGGGTTTGCAGGCAATTAGGGACTCTATGGTTGGTACGGTGGAGAAGAGAGGAATCTCCGGAGGACAGAGGAAAAGAGTAAATGTTGGACTCGAAATGGTGATGGAACCTTCACTTCTAATTTTAGATGAACCCACTTCTGGTTTGGACAGTTCATCATCTCAGTTACTTCTTAGAGCTCTTAGACGTGAAGCCCTTGAAGGAGTTAACATATGTATGGTCCTTCACCAACCTAGTTACACATTGTTCAGGATGTTTGATGACTTTATATTGCTAGCTAAAGGAGGACTTACAGTGTATCATGGACCAGTGAACAAGGTGGAAGAGTACTTTTCCGGCTTGGGAATTGTTGTCCCTGACCGCGTCAACCCTCCGGATTACTACATTGACATTTTAGAAGGAATCATAAAGATACCAGCAGGGTCAGGAGTGAGCCAGAAACAACTACCTGTTAGATGGATGCTTCATAATGGCTACCCTGTGCCGATGGATATGCTTGAACTCATTGAAGGAATGTCTACTAACAATACTGGTTCACCAAGTGTAGCAGCTTCCACTCCAGATAACAATGCTGGTCCATCTTTTGCTGGAGAACTTTGGCAGGATGTGAAGGCCAGTGTTGAGATGAAGAGGGACAATTTCAGTTATAAATTCTTGACTTCACACGATTTGTCCAATAGGAAGACACCTGGATCATTCACCCAATACAAGTACTTTCTTGGGAGAGTTGGTAAGCAGCGGCTACGAGAAGCTAGATCACTTGCCGTGGACTTTATGATCTTGCTTCTAGCAGGACTTTGCCTAGGAACACTAGCCAAAATGAGTGATGAATCATTTGGAGCAACTGGTTATACATACACAGTAATAGCAGTATCACTCCTTTCGAAGATCGCGGCTTTGAGATCCTTCTCCTTGGATAAGTTGCACTATTGGAGGGAGAGTGCTTCTGGCATGAGCAGCCTTGCATATTTTCTTTCAAAGGACACAGTTGATCATTTCAGTACACTCATCAAACCTCTGATGTATCTCTCCATGTTCTATTTCTTCAACAATCCAAGATCTTCTTTTCAAGCCAACTATGCTGTTCTGCTATGTTTGGTGTACTGTGTTACTGGCATAGCTTATGTGTTAGCAATCTTCCTTGAACCTGGTCCAGCCCAGCTGTGGTCTGCATTGCTTCCAGTAGTTTTGACACTCATCGCAACCTATGAAAATTCTGAGAATAATGGATTCATCCGCTTTGTGGCAGACATATGCTACGCAAGGTGGGCTCTTGAAGCATTTGTTATATCAAATGCCAAAAGATATGCTGGAGTTTGGTTAATAAGTCGATGTGGTGCACTCTATAAGAGTGGCTATGATCTCAACCGTTGGTATCAATGTTTAGGCCTTCTTGTAGCAACTGGAAGTAAACATGGCAAATTCAAACAACACTGGCTAGCTAGTGCTACAACTCATGACCTGTGCTCAACAACTTTGTAA 3336 0.4317 MMNKIEGYVEILGKVNFVTIVVVLTCIVGPASSQTAPGGGAAAGGGTGLPNEAAVQLFAQEMYKSMGSYTNVFKDSIRKHLGFCIVDASVFSFLHSFIHFCMDRDWDGAFNFSSDLSFLTNCAKNLQGDITQRMCIGSELEMYSSLVKSNKRFVNPNVNCNTSTWLNGCEPGWACKANEKVELNSTQKDIPVRNSDCQPCCEGFFCPPGLTCMIPYCPRGTLNATSGVCQPYRYQIPPGKLTHSCGGADIWADIRSSAEVFCAPGAFCPSNIIKNDCNKGYYCRTGSTAQERCFTLATCEPKSENQNITAYGVLVFAGVCFMLIIIYNCSDQVLATRERRQAKSRERAAAHVRETQAREKWKSAKDIAKKHAVGLQSSLSRTFSRQKTNKGSGTLPPSAPAKAKKKDKSNLSKIISDIEEDPDSQEGFNIQIGDKNVKKQAPKGKQLHTQSQVFKYAYNQIEKEKALQEQMKNMTFSGVISMANEIEIRKRPTIEVAFKDLTLTLKGKNKHLLRSVTGKLFPGRVSAVMGPSGAGKTTFLSALTGKAAGCTTTGQVLVNGQESPIRSYKKIIGFVPQDDIVHGNLTVEENLWFSARCRLAADLPKEEKVLVVERVIEALGLQAIRDSMVGTVEKRGISGGQRKRVNVGLEMVMEPSLLILDEPTSGLDSSSSQLLLRALRREALEGVNICMVLHQPSYTLFRMFDDFILLAKGGLTVYHGPVNKVEEYFSGLGIVVPDRVNPPDYYIDILEGIIKIPAGSGVSQKQLPVRWMLHNGYPVPMDMLELIEGMSTNNTGSPSVAASTPDNNAGPSFAGELWQDVKASVEMKRDNFSYKFLTSHDLSNRKTPGSFTQYKYFLGRVGKQRLREARSLAVDFMILLLAGLCLGTLAKMSDESFGATGYTYTVIAVSLLSKIAALRSFSLDKLHYWRESASGMSSLAYFLSKDTVDHFSTLIKPLMYLSMFYFFNNPRSSFQANYAVLLCLVYCVTGIAYVLAIFLEPGPAQLWSALLPVVLTLIATYENSENNGFIRFVADICYARWALEAFVISNAKRYAGVWLISRCGALYKSGYDLNRWYQCLGLLVATGSKHGKFKQHWLASATTHDLCSTTL* 1112
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0278 1111 SMART AAA_5 522 723 IPR003593 -
Amo13g0278 1111 ProSitePatterns ABC transporters family signature. 637 651 IPR017871 GO:0005524
Amo13g0278 1111 Gene3D - 484 731 IPR027417 -
Amo13g0278 1111 SUPERFAMILY P-loop containing nucleoside triphosphate hydrolases 497 730 IPR027417 -
Amo13g0278 1111 Pfam ABC transporter 513 665 IPR003439 GO:0005524
Amo13g0278 1111 PANTHER WHITE-BROWN COMPLEX HOMOLOG PROTEIN 30-RELATED 89 1088 - -
Amo13g0278 1111 Pfam ABC-2 type transporter 694 1087 IPR043926 GO:0140359
Amo13g0278 1111 MobiDBLite consensus disorder prediction 372 410 - -
Amo13g0278 1111 MobiDBLite consensus disorder prediction 375 395 - -
Amo13g0278 1111 ProSiteProfiles ATP-binding cassette, ABC transporter-type domain profile. 496 737 IPR003439 GO:0005524
Amo13g0278 1111 MobiDBLite consensus disorder prediction 345 364 - -
Amo13g0278 1111 PANTHER ABC TRANSPORTER G FAMILY MEMBER 28 89 1088 - -
Amo13g0278 1111 CDD ABCG_EPDR 494 720 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0278 Amo-Chr13 3832284 3838391 Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0278 523 716 Calmodulin-binding Proteins AT2G36910 29.703 7.82e-12 68.2
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0278 - - gmx:100794093 1647.1
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0278 13 3832284 3838391 Amo13g0278 13 3832284 3838391 ECH