Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0262 ATGGGCGAGGAGAAGAAGAAAAGCGAGGGTGGAGAAAACAGTGTGGTGTTGAAGGTGGATTGCAGCTGCGATGGCTGCTTTTCCAAGATCAGACACTGCCTCCGCTCTTACCCCGGCGTCAACAATGTCAAGGCGGAGAGCGACACCGGAAAGATAACCGTCACCGGAAAAGTTTCAGATCCCGCCAAAATGAAGGAGAGGCTTGAGAAGAAGCTCAACAAGAAGGTGATTCTTATCTCACCTCAGATCAAGAAGGAGAAAAACAACAACAATGGCGACCATAATAAAGAGAACAAAACCGACGGCGATAACAAGGAGAAGAAATCCAAAGAGAAAGAGACTCCGGTAATGACGACGGCGGTTCTGAAGGTGGCGCTCCACTGCCAGGGATGCGTCGACAAAATCCACAAAACTGTCTCCAAAACCAAAGGGGTGAATGAAATGGAGATAAACAAAGAGAAAGATACGGTGACAGTGAAGGGGACCATGGACGTCAAGGCTCTGGCTGCGAATCTAACGGAGAAGCTCAAGAGGAAGGTGGAGGTGGTCCCACCCAAGAAACCAGACAACAAGGAGAACAATGAAGGCAAGAAGAACAAGGGTGGTAATAATAATAATGAAGAAATGGTGACGATGGAGCTGAATAGAATGGAGTATATAGCAGCTCCACATGTTCCATTTCCATCTGCATATGGATATGGATATGCTCCTGTTGTGCATCCACATCATCATGGCGGTTACAGCTATATGCCTGCGTATACGTACCCGGAGCAGTTTCACTTGCATGCACCGCCACCACCTCCTCATAATATCTTCAGTGATGAGAACCCACATGCTTGTTCTCTCATGTGA 852 0.4765 MGEEKKKSEGGENSVVLKVDCSCDGCFSKIRHCLRSYPGVNNVKAESDTGKITVTGKVSDPAKMKERLEKKLNKKVILISPQIKKEKNNNNGDHNKENKTDGDNKEKKSKEKETPVMTTAVLKVALHCQGCVDKIHKTVSKTKGVNEMEINKEKDTVTVKGTMDVKALAANLTEKLKRKVEVVPPKKPDNKENNEGKKNKGGNNNNEEMVTMELNRMEYIAAPHVPFPSAYGYGYAPVVHPHHHGGYSYMPAYTYPEQFHLHAPPPPPHNIFSDENPHACSLM* 284
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0262 283 MobiDBLite consensus disorder prediction 181 202 - -
Amo13g0262 283 CDD HMA 121 181 IPR006121 GO:0046872
Amo13g0262 283 SUPERFAMILY HMA, heavy metal-associated domain 15 70 IPR036163 GO:0046872
Amo13g0262 283 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 3 5 283 - -
Amo13g0262 283 MobiDBLite consensus disorder prediction 181 206 - -
Amo13g0262 283 SUPERFAMILY HMA, heavy metal-associated domain 115 179 IPR036163 GO:0046872
Amo13g0262 283 MobiDBLite consensus disorder prediction 79 115 - -
Amo13g0262 283 CDD HMA 22 76 IPR006121 GO:0046872
Amo13g0262 283 ProSiteProfiles Heavy-metal-associated domain profile. 118 181 IPR006121 GO:0046872
Amo13g0262 283 PANTHER HEAVY METAL-ASSOCIATED ISOPRENYLATED PLANT PROTEIN 6 5 283 IPR044594 GO:0046872
Amo13g0262 283 Gene3D - 11 86 - -
Amo13g0262 283 Gene3D - 115 187 - -
Amo13g0262 283 Pfam Heavy-metal-associated domain 122 181 IPR006121 GO:0046872
Amo13g0262 283 Pfam Heavy-metal-associated domain 19 74 IPR006121 GO:0046872
Amo13g0262 283 ProSiteProfiles Heavy-metal-associated domain profile. 22 70 IPR006121 GO:0046872
Amo13g0262 283 MobiDBLite consensus disorder prediction 87 114 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0262 Amo-Chr13 3693077 3694859 Tandem
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0262 - - adu:107496807 345.51
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0262 13 3693077 3694859 Amo13g0262 13 3693077 3694859 ECH