Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0257 ACTTCTCCATCACCATCATCATCCATCAATAGTAATGATCTTCATCATCTCTCTCGAGCAGAGAGGCTCATAAGAAGCCTTAATCTGTTTCCAACAAAGCCAGTTAACATCATAGGAGGAGGAGTAGGTGGTGATGACGACGATGTGATGTTCTATTTTTTCTTTGAATCTCGGAACAATAATAAGGATGACCCAGTTGTGATATGGTTGACTGGAGGACCAGGGTGTAGCAGTGAACTTGCATTGTTCTATGAAAATGGTCCGTTCATAATTACTAGTAACAACCTCTCACTTCTATGGAATGATTATGGTTGGGACAAGGCATCAAATATTCTATTTGTTGACCAACCCACTGGGACAGGTTTTAGTTATAGTTCTGATGACTCTGACATTCGCCATGATGAGAATGGTGTTAGCAATGATTTGTACGATTTCTTGCAGGCATTTTTCAAAGAACACTCGGAGTTTGTGAATAATGACTTCTATATCACTGGAGAATCATATGCAGGACATTACATTCCAGCTTTTGCATCTCGAGTTCATCAAGGAAACAAAAATCATGAAGGAATTCATATAAATTTAAAGGGTTTGGCTATTGGTAATGGATTAACTAATCCTGGAATCCAATACAGAGCATACACTGATTATGCATTACACAATAAATTAATTACAAAAGATGATCATCAAACTATCAATAAGTTGCCAAGGAAGGTGAAAAAGCCTTACTATGACATCCGAAAAAAATGCTATGGGGAAATGTGCTATGATTTTTCAGACATGGAGAGATTTTTTAGACAAAGAAAAGTGAGGGAAGCTTTAGGTGTTGGGAATTTGGAGTTTGTTTCATGTAGTAGGAGAGTGTATGATGCTATGAATGGGGATTGGATGAAGAATTTGGAACTTGATATTCCAAATCTTCTTGAAGATGGTATTAGATTGCTTGTGTATGCTGGTGAAAAAGATCTCATTTGCAATTGGCTTGGGAATTCAAGGTGGGTTCATGCCATGAAATGGTCAGGTGAAGAACAATTTAGAGGATCTCCTACAATCCAATTTGTGGTCAACGGTTCAGATGCCGGTTCACTAAAAAGCTATGGCCCACTTGCTTTCCTTAAGGTAAATGAAGCAGGGCACATGGTGCCAATGGATCAACCAGAAGCTGCACTTGAAATGATCACAAGATGGATGAAAGGGACATTAACTGTCTCTCATCACTCTTTGTTTGTTCTTGTTCTACTTTTCATTAACATTATGATGTCCCCAGCAGAAAGGCTGATAAGAAGCTTCAATCTGTTTCCAAGAAAATCAGTAAACATAAGAAAAGGAAGTAGTGATGATGTGTTTGTCCCTGGAAAATTAGTGGAGAAGAAGTTCTCATTTCTTGCTGATTCTTCTGTTCAAGAATTAGGTCATCATGCCGGCTATTATTCTCTCCCTCGTACCAAAGCCGCAAGGATGTTCTATTTTTTCTTTGAATCTCGGAACAATAATAGCAAAGATGCCCCAGTTGTGATATGGTTAACTGGAGGACCAGGATGTGGCAGTGAACTTGCATTGTTCTATGAGAATGGTCCTTTCAAAATTACTAATAACATGTCTCTTCTATGGAATGACTATGGTTGGGACAAGGTTTCAAACCTTATATATGTTGATCAACCAACTGGGACAGGGTTCAGCTACAGTTCTGATGAGTCAGACCTTCGCCATGATGAAACGGGTGTTAGCAACGATCTTTACGATTTCTTACAGGCATTTTTCAAACAGCATCCTCAGTTTGGTTTTGCTATTGGCAACGGATTAACCAATCCGGGGATTCAATATGCAGCATACACGGATTTTGCATTATCCAATAAATTAATTACACAGAGTGATTACAACAACATCAACTCCAGGGTCCAAGGATGTGAACAAGAAATAAAAAACTGCGCAACTGAAGGTGGAGACCAGTGTGCCGCCGCTAAAGCCACATGCGACCAAATATTCCAAAGTATCCTTAGCGCTGCTGGCAACGTTAATTACTATGACATTAGAAAAAAATGTGAAGGAGCTTTGTGCTATGACTTCTCAAACGTGGATACACTCTTAAACGAGAAGTCAGTGAAGAAGGCTTTAGGAGTGGATGATGATTTGGACTATGTTTCATGCAGTGATGAAGTGTATTTTGCTATGGTTAATGACTTCATGGTCAATTTGGAAGTGCCTATTCCACCTCTTCTTGAAGATGGGATTAGGTTTCTTGCCTATGCTGGTGAAGAAGATCTCATTTGCAATTGGCTAGGTAATATAAGATGGATTAGTGCCATGAAATGGTCAGGTCAAAAAGAGTTTAACGCAACTCCTACAGTCCAATATAAAGTCAATGGTGTAGAGGCAGGTTCTCTATCAAGCCATGGACCTCTCACTTTCTTAAAGATATATAAAGCTGGACACTTGGTTCCTATGGATCAACCAGAAGCCGCACTTGATATGCTCACAAGATGGATGCAAGCCAAATTAAATTAA 2502 0.3921 TSPSPSSSINSNDLHHLSRAERLIRSLNLFPTKPVNIIGGGVGGDDDDVMFYFFFESRNNNKDDPVVIWLTGGPGCSSELALFYENGPFIITSNNLSLLWNDYGWDKASNILFVDQPTGTGFSYSSDDSDIRHDENGVSNDLYDFLQAFFKEHSEFVNNDFYITGESYAGHYIPAFASRVHQGNKNHEGIHINLKGLAIGNGLTNPGIQYRAYTDYALHNKLITKDDHQTINKLPRKVKKPYYDIRKKCYGEMCYDFSDMERFFRQRKVREALGVGNLEFVSCSRRVYDAMNGDWMKNLELDIPNLLEDGIRLLVYAGEKDLICNWLGNSRWVHAMKWSGEEQFRGSPTIQFVVNGSDAGSLKSYGPLAFLKVNEAGHMVPMDQPEAALEMITRWMKGTLTVSHHSLFVLVLLFINIMMSPAERLIRSFNLFPRKSVNIRKGSSDDVFVPGKLVEKKFSFLADSSVQELGHHAGYYSLPRTKAARMFYFFFESRNNNSKDAPVVIWLTGGPGCGSELALFYENGPFKITNNMSLLWNDYGWDKVSNLIYVDQPTGTGFSYSSDESDLRHDETGVSNDLYDFLQAFFKQHPQFGFAIGNGLTNPGIQYAAYTDFALSNKLITQSDYNNINSRVQGCEQEIKNCATEGGDQCAAAKATCDQIFQSILSAAGNVNYYDIRKKCEGALCYDFSNVDTLLNEKSVKKALGVDDDLDYVSCSDEVYFAMVNDFMVNLEVPIPPLLEDGIRFLAYAGEEDLICNWLGNIRWISAMKWSGQKEFNATPTVQYKVNGVEAGSLSSHGPLTFLKIYKAGHLVPMDQPEAALDMLTRWMQAKLN* 834
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0257 833 PRINTS Carboxypeptidase C serine protease (S10) family signature 114 124 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 PRINTS Carboxypeptidase C serine protease (S10) family signature 101 113 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 PRINTS Carboxypeptidase C serine protease (S10) family signature 800 813 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 PRINTS Carboxypeptidase C serine protease (S10) family signature 149 174 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 593 830 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 Gene3D alpha/beta hydrolase 463 593 IPR029058 -
Amo13g0257 833 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 49 234 - -
Amo13g0257 833 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 416 592 - -
Amo13g0257 833 SUPERFAMILY alpha/beta-Hydrolases 470 829 IPR029058 -
Amo13g0257 833 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 49 234 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 239 400 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 Gene3D alpha/beta hydrolase 32 239 IPR029058 -
Amo13g0257 833 Gene3D alpha/beta hydrolase 594 833 IPR029058 -
Amo13g0257 833 Gene3D alpha/beta hydrolase 240 410 IPR029058 -
Amo13g0257 833 Pfam Serine carboxypeptidase 246 398 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 Pfam Serine carboxypeptidase 469 592 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 Pfam Serine carboxypeptidase 44 234 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 Pfam Serine carboxypeptidase 593 829 IPR001563 GO:0004185|GO:0006508
Amo13g0257 833 SUPERFAMILY alpha/beta-Hydrolases 40 399 IPR029058 -
Amo13g0257 833 ProSitePatterns Serine carboxypeptidases, serine active site. 163 170 IPR018202 GO:0004185
Amo13g0257 833 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 239 400 - -
Amo13g0257 833 PANTHER SERINE CARBOXYPEPTIDASE-LIKE 48-RELATED 593 830 - -
Amo13g0257 833 PANTHER SERINE PROTEASE FAMILY S10 SERINE CARBOXYPEPTIDASE 416 592 IPR001563 GO:0004185|GO:0006508
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0257 Amo-Chr13 3613932 3625721 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0257 K16298 - gmx:100798795 572.778
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0257 13 3613932 3625721 Amo13g0257 13 3613932 3625721 ECH