Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0256 ATGGAGAAGGTAATGAACATTCTGAAGCCGAAGCCGAACCCTCAACAGTTGTTAAGAGATTGGCAGCGTCGCCTTCGTCAGGAGTGCCGCAACATTGAGCGCCAAATTCGAGATATACAGAGAGAAGAGAAGAATGTACAAAAGGCGATTAAAGAAGCTGCAAAGAGGAACGATATGGGCTCTGCAAAGGCCCTTGCCAAGGAACTTGTGAGATCTAAGAAAACAGTAAACAGACTTTATGAAAATAAGGCACAATTGAATTCAATATCAATGCACCTTGGAGAGAGTGTGGCAATTGCTCGTACTGTGGGACATCTATCCAAGAGTGCCGAGGTTATGAAGCTTGTCAATAACCTCATGAAGGCTCCTGAAATGGCTGTGACAATGCAGGAGTTTAGCAAAGAAATGACAAAGGCAGGAGTAATCGAGGAGATAGTAAACGATGCTGTTGACTCAGCTCTAGATTCTGAGGACATAGAAGATGAGATCGAAGAAGAAGTTGACAAGGTATTGACAGCAATAGCTGGAGAGACAGCTGCAGAGCTTCCGGAAGCCGTTAGGAAACAAAAGTTGAAGCAACCTGAACAAAGGGTTGGAACCAGTGAAGGGGAAGAGGCTATAGCTGAGGGTGTTGATGATGAGGAAGAAATGGAAGAAATAAGGGCAAGACTTGCCAAAGTTAGGTCATAA 690 0.4435 MEKVMNILKPKPNPQQLLRDWQRRLRQECRNIERQIRDIQREEKNVQKAIKEAAKRNDMGSAKALAKELVRSKKTVNRLYENKAQLNSISMHLGESVAIARTVGHLSKSAEVMKLVNNLMKAPEMAVTMQEFSKEMTKAGVIEEIVNDAVDSALDSEDIEDEIEEEVDKVLTAIAGETAAELPEAVRKQKLKQPEQRVGTSEGEEAIAEGVDDEEEMEEIRARLAKVRS* 230
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0256 229 Coils Coil 18 56 - -
Amo13g0256 229 Gene3D - 9 185 - -
Amo13g0256 229 PANTHER VACUOLAR PROTEIN SORTING-ASSOCIATED PROTEIN 24 HOMOLOG 1-LIKE ISOFORM X1 3 229 - -
Amo13g0256 229 Pfam Snf7 21 187 IPR005024 GO:0007034
Amo13g0256 229 PANTHER CHARGED MULTIVESICULAR BODY PROTEIN 3 229 IPR005024 GO:0007034
Amo13g0256 229 MobiDBLite consensus disorder prediction 185 199 - -
Amo13g0256 229 MobiDBLite consensus disorder prediction 185 215 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0256 Amo-Chr13 3609243 3611149 Wgd
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0256 K12193 - gmx:100797244 375.17
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0256 13 3609243 3611149 Amo13g0256 13 3609243 3611149 ECH