Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0185 ATGGTTTTGGTTCTAACACCTTCTTCTTCCTCTGTTTGTCTTCTCTATCGCAGTCCCCCAAGGTACGGCGACGTTCGATGCTCCTCCAGCGTGCAGGAGATACAGAAGCCTCCCGGAGAAGGGCTCAGCTCGGATCTCCGGGCATCGGAGCCGTTGCCTCCGTTAAAGGTAGCGAAGAGGGTTGTTCTGGTGAGGCACGGGCAGAGCACGTGGAATGCAGAGGGGAGGATCCAAGGGAGCTCTAACTTCTCTGTGCTCACCAAAAAGGGCGAGTCTCAGGCCGAGACTTCCCGCCAGATGCTCATTGATGACAACTTCGACGCTTGCTTTGCAAGTCCTTTGGAACGGTCCAAGAGAACAGCGGAGATCATTTGGGGAGGACGTAAAGAACCAATAATTCCAGAGTATGAATTGAGGGAGATTGACTTGTACTCATTTCAAGGTCTGTTGAAGAATGAGGGGAAAGAGAGATATGGTTCTGCTTATCGTCAATGGCAGCTGGATGCTGCGAATTTCATCATCGATGGTCATTATCCGGTGAGAGAGCTATGGGAACGTGCTAGGAACTGCTGGACTAAAATCTTAGCACATGATAGCAGGTCTGTTCTTGTGGTTGCTCACAATGCCGTTAATCAGGCTCTTGTTGCTACAGCAATTGGTTTAGGGGTGGAGTATTTTAGATGTTTACTTCAGAGCAATTGTGGTGTAAGTGTGCTGGATTTCATTCCTAGGCCTGAGGGCGGATCTCCGGACATTTGCCTCGATCGCTTAAATCAGACCCCTGGTTCACCAGTGGCTGGTGGAAAATCTGGAGGCAGAGATACAAATAAGCGGATCATACTTGTTTGTAATGGATCTACACAGGGAAATACGGAGAATGATTTTCCTTTTGCTGGTGATCATCCAATGAACATGCTTGGTGTTATACAGTCCCAGAAATCTGCAGAGCTACTTCTTGATTTGAAAGTGAGTTCCATAATTAGTAGTCCTAACAAGGCTTGTTTTGAGACTGCCATGACCATCTCCAAGGTACAAGAAGCTGCAGATTGCTTGGGTGCAGACTGTGTGCCACGCTATGTTGAGTTGAAGCAAATCGGTAGCCTAGATGTTGAAACAATCTTTCAGCAATCCAAAATGGATCTATCCAACTTTCCCCCAATTCAGCCTGGATGGTTAAATAGGATTGATGATGGGTTGAGAACAACATTATGGGATCAATCTGAAAAGGCATGGCAATCCCTGTTAGATGAAATATCCGATGAATCGAGCGAAGGAGTCTTGGTCGCGGTTGCTCATCCAGCAATCCACATAGCACTAATGGGGCACTGCCTTAACTTGACCAAGGAATGGTTAGGGTCATTTCATCTTGACGAAGGGAGTGTTAGTGTCCTTGACTTTCCTGATGGCCCTAAAGGAAGAGGTGTCATAAGGTGCATAAATTATACTGCACATTTGGGGAGATGGTCCATCCCTATTACAAGATCAACAGAGGATGGTGAAGAGTTTTAA 1509 0.4679 MVLVLTPSSSSVCLLYRSPPRYGDVRCSSSVQEIQKPPGEGLSSDLRASEPLPPLKVAKRVVLVRHGQSTWNAEGRIQGSSNFSVLTKKGESQAETSRQMLIDDNFDACFASPLERSKRTAEIIWGGRKEPIIPEYELREIDLYSFQGLLKNEGKERYGSAYRQWQLDAANFIIDGHYPVRELWERARNCWTKILAHDSRSVLVVAHNAVNQALVATAIGLGVEYFRCLLQSNCGVSVLDFIPRPEGGSPDICLDRLNQTPGSPVAGGKSGGRDTNKRIILVCNGSTQGNTENDFPFAGDHPMNMLGVIQSQKSAELLLDLKVSSIISSPNKACFETAMTISKVQEAADCLGADCVPRYVELKQIGSLDVETIFQQSKMDLSNFPPIQPGWLNRIDDGLRTTLWDQSEKAWQSLLDEISDESSEGVLVAVAHPAIHIALMGHCLNLTKEWLGSFHLDEGSVSVLDFPDGPKGRGVIRCINYTAHLGRWSIPITRSTEDGEEF* 503
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0185 502 PANTHER BROAD-SPECIFICITY PHOSPHATASE YOR283W-RELATED 34 502 - -
Amo13g0185 502 CDD HP_PGM_like 60 241 IPR013078 -
Amo13g0185 502 Pfam Histidine phosphatase superfamily (branch 1) 279 469 IPR013078 -
Amo13g0185 502 Pfam Histidine phosphatase superfamily (branch 1) 61 242 IPR013078 -
Amo13g0185 502 SUPERFAMILY Phosphoglycerate mutase-like 277 490 IPR029033 -
Amo13g0185 502 PANTHER 2-CARBOXY-D-ARABINITOL-1-PHOSPHATASE-RELATED 34 502 - -
Amo13g0185 502 Gene3D - 271 489 IPR029033 -
Amo13g0185 502 SMART PGAM_5 278 439 IPR013078 -
Amo13g0185 502 SMART PGAM_5 60 214 IPR013078 -
Amo13g0185 502 CDD HP_PGM_like 278 477 IPR013078 -
Amo13g0185 502 ProSitePatterns Phosphoglycerate mutase family phosphohistidine signature. 63 72 IPR001345 GO:0003824
Amo13g0185 502 SUPERFAMILY Phosphoglycerate mutase-like 59 245 IPR029033 -
Amo13g0185 502 Gene3D - 59 245 IPR029033 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0185 Amo-Chr13 2225918 2229116 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0185 K22200 - gmx:100794084 811.986
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0185 13 2225918 2229116 Amo13g0185 13 2225918 2229116 ECH