Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0180 ATGGCATCAACACCAAAACAGTCTTATGAACAGCAGCCACTGAATGCGCAGCAGCGAGCTAGGAACTCGGGGATGATCAACTCTAGCCAGAGTCCAACAGGGGATGACAGGGAAGAGGAGATGTCGAGATCAGCCTTGGCGATGTTTCGAGCCAAGGAAGAAGAGATTGAAAGGAAGAAAATGGAGGTGAGGGATAAGGTTCATACTTATCTGGGAAAAGTTGAAGAAGAAACAAAGCGCTTGGCTGAGATTAGAGAAGAGCTTGAATCTCTCACAGATCCATTGAGGAAAGATGTTGCAGTAATTCGCAAGAGGATAGACATTATTAACAAAGAGTTAAAGCCACTGGGTCAGACCTGCCAAAAAAAGGAGAGAGAATACAAGGATGCCCTTGAAGCTTTCAATGAGAAAAACAGAGAAAAGACTCAACTAGTTACAAAATTGATGGAGCTGGTGACTGAAAGTGAGAAGTTGAGGATGAAGAAGCTTGAAGAGCTAAGCAAAAACGTAGATAGCCTCCATTGA 525 0.4362 MASTPKQSYEQQPLNAQQRARNSGMINSSQSPTGDDREEEMSRSALAMFRAKEEEIERKKMEVRDKVHTYLGKVEEETKRLAEIREELESLTDPLRKDVAVIRKRIDIINKELKPLGQTCQKKEREYKDALEAFNEKNREKTQLVTKLMELVTESEKLRMKKLEELSKNVDSLH* 175
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0180 174 Coils Coil 71 91 - -
Amo13g0180 174 PANTHER - 11 173 - -
Amo13g0180 174 PANTHER RAB6-INTERACTING PROTEIN GORAB 11 173 IPR007033 -
Amo13g0180 174 Coils Coil 120 140 - -
Amo13g0180 174 MobiDBLite consensus disorder prediction 1 32 - -
Amo13g0180 174 Pfam Transcriptional activator 21 172 IPR007033 -
Amo13g0180 174 MobiDBLite consensus disorder prediction 1 45 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0180 Amo-Chr13 2196209 2198268 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0180 - - gmx:100499699 285.419
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0180 13 2196209 2198268 Amo13g0180 13 2196209 2198268 ECH