Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0166 ATGCAGCATGAACAACAGACGGACAACATTTCCACCATCATCCATGCATTTTCCATGAAACCCACTCTTCGCCCACTCTTCGCACTTCTCCTCCTCTTCCTAGCCACCCTCACTTCACGGGCCATGCTCCGCCGCCCCCACACGCACCTCAACTCCACGCTCCTCCGCCACGCCGCCATCCAGATCGCCGACCACAACCTCAACCACGACATCCGGAAGCTCCTCGATGGTAACTTCGGCAGCCAGCTCCGCCTCCGGACCTTCATCTCGTGGCGGCGGATCATCCATCACGACGTCGCTAGCGCCGGAGACAGATCCTCCTCCCGGAGCACCATTCCGGCGACGCTCCGTTCCCCTCTGTTCTACCGTTACTGGCTTGATTTCCGTAAGGTCCTGAACGATTGGGCGAGGAAGAAGCGATTCCAAGCAAATATCATGGATGAGCTGATTCGGTTGGTGAAAGCCCCCATTGACAAGAAAAACGGTATCTTGGATGGGAATTTACGAAAATACGGTTCTTGTGCGGTTGTGGGGAACAGCGGGATCCTGTTGAAGAGTGATTATGGTAGGTTGATTGATTCGCACGATGCAGTGATAAGGCTGAACAATGCGAGGGTGAATAACTTTGAGAACAAGGTTGGGAAGAAGACAACAATATCATTTGTGAATAGCAACATTGTGCACCTTTGTGCCAGAAGAGTTGGGTGCTATTGCCACCCTTATGGCTCTCACATCCCCATTGTTATGTATATTTGTCAGGCCGTCCACTTTCTGGATTTCACTGTCTGCAATGCTTCCCACAAGGCTCCCCTCTTGGTAACTGATCCCAGGTTTGATGTCTTGTGCGCAAGGATTGTCAAGTACTATTCATTGAAGAGGTTTGTGGAGCAAAGTGGCAAGACCTTGGACGAGTGGGGGAGTGCCCATGATGGGGCTCTCTTCCATTACTCTTCTGGATTGCAGGCCGTCATGCTTGCTCTCGGCATTTGTGATCAAGTTAGCATCTTTGGATTTGGTAAATCAGCTTCTGCCAAACACCATTATCATACCAACCAGAAGGCTGAGCTCCATTTGCACGATTACGAGGCTGAGTATCAGTTCTACCGCCACCTTGTCGATCGCCACAACCCTATACCATTCCTCTCAGACAACTTCAACCTCCCCCCTGTTGTTTTTTATCACTGA 1185 0.5105 MQHEQQTDNISTIIHAFSMKPTLRPLFALLLLFLATLTSRAMLRRPHTHLNSTLLRHAAIQIADHNLNHDIRKLLDGNFGSQLRLRTFISWRRIIHHDVASAGDRSSSRSTIPATLRSPLFYRYWLDFRKVLNDWARKKRFQANIMDELIRLVKAPIDKKNGILDGNLRKYGSCAVVGNSGILLKSDYGRLIDSHDAVIRLNNARVNNFENKVGKKTTISFVNSNIVHLCARRVGCYCHPYGSHIPIVMYICQAVHFLDFTVCNASHKAPLLVTDPRFDVLCARIVKYYSLKRFVEQSGKTLDEWGSAHDGALFHYSSGLQAVMLALGICDQVSIFGFGKSASAKHHYHTNQKAELHLHDYEAEYQFYRHLVDRHNPIPFLSDNFNLPPVVFYH* 395
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0166 394 Pfam Glycosyltransferase family 29 (sialyltransferase) 138 374 IPR001675 GO:0006486|GO:0008373
Amo13g0166 394 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 41 394 - -
Amo13g0166 394 PANTHER BETA-1,6-GALACTOSYLTRANSFERASE GALT29A 41 394 - -
Amo13g0166 394 Gene3D Glycosyl transferase family 29 100 377 IPR038578 -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0166 Amo-Chr13 2076451 2077733 Dispersed/Wgd
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0166 169 378 Glycosyltransferase AT3G48820 26.389 2.51e-13 69.3
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0166 K00786 - gmx:100789506 543.117
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0166 13 2076451 2077733 Amo13g0166 13 2076451 2077733 ECH