Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0144 ATGGACAAAAAGGTCAAGTGGAGCTGGACCTCCGCGCTTATCGGAGCGGCATCAGCGGTGGCAGCCACGGCGGTGCTCTCAGCGAAGCCCAAGGACCCCACCTTCCACCTTATCTCCATCAACTTCACATCTTTCAAGCTCARCCTTCCAACCATCCTCGATGCAGAACTAGTCCTCACMGTCCATGTCACCAACCCCAACATCGCACCCATTCACTACTCCTCCACCGCCATGTCCATATTCTACMAGGGATCCCTCCTCGGCTCWGCCGCTGTAGCTGCCGGCTCCCAGCCCCCACGCTCCTGCCAGCTCCTCCGCCTCCCTGCGCGCCTCCGCGGCCTGGAGCTCGCCCAGCACGCCAAGTGCTTYGTCGCTGACGTGGCCAGGCGGGAGATGGTGCTTGACGCCGCCGTGGATATCAGCGGCACCGCCAGGGTGCTTTGGTGGGACCACAATTTTAAGGTGCACGTTGACAGCCACGTTACTGTCGATCCTGTGTTCCTTGATGTCATTGATCAGGAAAATACTTCGGAACTTGAACTTTTTGCCGCTTAA 555 0.582 MDKKVKWSWTSALIGAASAVAATAVLSAKPKDPTFHLISINFTSFKLXLPTILDAELVLTVHVTNPNIAPIHYSSTAMSIFYXGSLLGSAAVAAGSQPPRSCQLLRLPARLRGLELAQHAKCFVADVARREMVLDAAVDISGTARVLWWDHNFKVHVDSHVTVDPVFLDVIDQENTSELELFAA* 185
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0144 184 Pfam Late embryogenesis abundant protein 60 157 IPR004864 -
Amo13g0144 184 Gene3D - 13 166 - -
Amo13g0144 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 171 - -
Amo13g0144 184 SMART why 40 156 IPR013990 GO:0009269
Amo13g0144 184 PANTHER LATE EMBRYOGENESIS ABUNDANT (LEA) HYDROXYPROLINE-RICH GLYCOPROTEIN FAMILY 3 171 - -
Amo13g0144 184 SUPERFAMILY LEA14-like 21 162 - -
       

Duplication type information

Select Gene Chromosome Start End Duplicated_type
Amo13g0144 Amo-Chr13 1906644 1907198 Dispersed
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0144 - - adu:107476511 335.88