Gene search

Sequence information

Select Gene Cds Cds_length GC_content Pep Pep_length
Amo13g0119 ATGGCGCCTAGAAAATCACCGCGCGAGCGCCAAATGCTGGTACTCGAGTCGGTCATCGCCCTCGTGTTCGTGCTGGTAGCCTGCGTCGAGCTCTGCGACGGCGCCACCGTCGTCGATGTCTACCGTCTCATTCAGTACGACATATCCGGCGCCCCCTTCGGATCTCGCCTCGCCGGACTCAATCACCACGCCACATCCCTCCACTTCTCTCCGCACGCCGATCTCTCTCGCACAGTACTTCTCATTCCTCTTCGCGAGTTCAACATCTCCTTCGTCAAAGAATATATTGCAGAAAACAAGCCTCTGGGGGGTTTGTTATTCTTGCTGCCACAGATATTCAATTTTGAAAATAAAGGTGAAGTGGGAAGTAACCATTTAGATGGAACTGAAGAGTTGCTGAAGAATGTGTTGGCTGAACTTGAACAGATACTTATACGTACCAACTTACCTTATCCTGTTTATTTTGCTTTTGAGGATGACAACATTAATGCTGTGTTAGCTGATATCAAGAAGAGTGATATCACTGGTCAGCCAGCTACTGCAACTACTGGCGGATACAAATTTGTTGTTTCAGCTCTAGAACCAAAGAGTCTTGTCTCTCCATCCATTACCAACATTCAGGGGTGGTTGACAGGACTGAAGGCAGGTGATGATGCACATCAATTACCCACCATCGCAATAGTGGCATCATATGACACCTTTGGAGCTGCTCCTGCATTATCAGTGGGAAGTGATAGTAATGGAAGTGGTGTTGTGGCTCTTCTTGAAGTAGCTAGGTTGTTTTCACTTTTGTATTCTAATCCAAAGACCAGAGGCCAATACAATCTGTTGTTTGGGCTAACATCTGGTGGGCCTTACAACTACAATGGAACTCGTAAGTGGCTTCGGAGCTTTGATCAACGATTGCGTGAAAGCATTGACTATGCTATTTGCATAGATAGTATTGGCTCCTGGGAGAATGAATTGTGGATTCATGTGTCTAAGCCTCCAGAAAATTCCTACATTAAGCAAATCATGGAAGATTTTTCAAGTGTTGCAGAAGAGTTGGGCTTTAATGTGAATTTGAAGCATAAGAAAATAAATATCTCAAATCCTCGAGTAGCTTGGGAGCATGAACAGTTTTCAAGGTTGAGAGTTACTGCTGCCACTCTTTCTGAACTTTCGGCTGCACCTGAACTGCTAGAAAAGACTGGTGGTTTGATTGACAGCAGGCATTTTGTAGATGAAAAGGCAATTATCAGAGGTGTGAAATTAGTTGCTGAGAGTCTTGCACGGCATATTTACGGACATCAAGGAAAGAACATCCAAATCTTTGCAGACAACAGTAACTTGGCTGTAAATCCTTATTATATCCGATCATGGTTAGATGTTTTGTCCCAAACACCTCGAGTGGCACCATTTTTCTCGAAAGATGATCCTTTTGTCATGGCTCTGAAAAAGGAATTAGAAGATCATACAGATGAGGTCAATCTGCAACGTGAAGCTCTAGATGGGATGTTCACATTTTATGATTCTACTAGCGCAAAGCTGAACATATATCAGGTTGCCAGTGTCACATTTGACTTGTTATTGCTTCTAGTACTGGGGTCGTATTTAATTGTGCTGTTCAGTTTCTTGGTCATCACAACTAGGGGTCTTGATGATCTGATCAGTTTATTTCGGCGGCCTCCCTCACGAAAAGTGAAGACTGCATAA 1695 0.4389 MAPRKSPRERQMLVLESVIALVFVLVACVELCDGATVVDVYRLIQYDISGAPFGSRLAGLNHHATSLHFSPHADLSRTVLLIPLREFNISFVKEYIAENKPLGGLLFLLPQIFNFENKGEVGSNHLDGTEELLKNVLAELEQILIRTNLPYPVYFAFEDDNINAVLADIKKSDITGQPATATTGGYKFVVSALEPKSLVSPSITNIQGWLTGLKAGDDAHQLPTIAIVASYDTFGAAPALSVGSDSNGSGVVALLEVARLFSLLYSNPKTRGQYNLLFGLTSGGPYNYNGTRKWLRSFDQRLRESIDYAICIDSIGSWENELWIHVSKPPENSYIKQIMEDFSSVAEELGFNVNLKHKKINISNPRVAWEHEQFSRLRVTAATLSELSAAPELLEKTGGLIDSRHFVDEKAIIRGVKLVAESLARHIYGHQGKNIQIFADNSNLAVNPYYIRSWLDVLSQTPRVAPFFSKDDPFVMALKKELEDHTDEVNLQREALDGMFTFYDSTSAKLNIYQVASVTFDLLLLLVLGSYLIVLFSFLVITTRGLDDLISLFRRPPSRKVKTA* 565
       

Annotation information

Select Seq ID Length Analysis Description Start End IPR GO
Amo13g0119 564 ProSiteProfiles Prokaryotic membrane lipoprotein lipid attachment site profile. 1 28 - -
Amo13g0119 564 CDD M28_nicalin_like 137 430 - -
Amo13g0119 564 PANTHER NICALIN 11 563 - -
Amo13g0119 564 Coils Coil 126 146 - -
Amo13g0119 564 PIRSF Nicalin 3 559 IPR016574 GO:0009966|GO:0016020
Amo13g0119 564 PANTHER NICALIN 11 563 IPR016574 GO:0009966|GO:0016020
Amo13g0119 564 ProSitePatterns EF-hand calcium-binding domain. 245 257 IPR018247 -
Amo13g0119 564 Pfam Nicastrin 225 362 - -
Amo13g0119 564 SUPERFAMILY Zn-dependent exopeptidases 197 422 - -
Amo13g0119 564 Coils Coil 475 495 - -
Amo13g0119 564 Gene3D Zn peptidases 150 415 - -
       

Functional genes information

Select Gene Gene_start Gene_end Function Ath_gene Identity(%) E-value Score
Amo13g0119 4 562 EF-hand Containing Proteins AT3G44330 72.598 0.0 841
       

Pathway information

Select Query KO Definition Second KO KEGG Genes ID GHOSTX Score
Amo13g0119 - - gmx:100779713 968.378
       

Event-related genes

Select Gene_1 Chr_1 Start_1 End_1 Gene_2 Chr_2 Start_2 End_2 Event_name
Amo13g0119 13 1721019 1729882 Amo13g0119 13 1721019 1729882 ECH